Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq1151 118 7e-22 >seq1151 Length=1634 Score = 118 bits (130), Expect = 7e-22 Identities = 106/132 (80%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 27233 GCGCGAGGTGGCGTGCTTCCGGGCTACACCCCCGGCCGGGACGTGCACAAGTTCATCTCC 27292 ||||| ||||||| || || || ||| |||| ||| |||| || ||| ||| ||||| Sbjct 785 GCGCG-GGTGGCGCCCTGCCCGGATACCCCCCGGGCAGGGATGTCTACACCTTCCTCTCC 843 Query 27293 CCGACCGGCGGCGAACTCCACCTGTCCGGTGGCGAGGCCATCATGCGGCCGGAGTGGACT 27352 ||||| ||||||| ||| | |||||||| ||||||||||||||||| || |||||||| Sbjct 844 CCGACTGGCGGCGGCCTCGAACTGTCCGGCGGCGAGGCCATCATGCGCCCCGAGTGGACC 903 Query 27353 CGGGCCGTGGGC 27364 || ||||| ||| Sbjct 904 CGCGCCGTCGGC 915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313897082449377