Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031251.1 Length=47880 Score E Sequences producing significant alignments: (Bits) Value seq234 86.0 2e-12 >seq234 Length=15970 Score = 86.0 bits (94), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 11/217 (5%) Strand=Plus/Plus Query 3464 CCGGATCAACAGCCCGGGCGGCAACGTGTTCGACGGGATCGCGATCCTCAACGCGCTACG 3523 |||||||||| || |||||| |||| | || || | |||||| ||||||| || | Sbjct 8119 CCGGATCAACTCGCCCGGCGGCTACGTCATGGAAGGTCTGGCGATCTTCAACGC-CTTTG 8177 Query 3524 CGGTCAC-AAGGC------CC---ACGTCACCACCATCGTCGACGGCCTCGCAGCGTCAG 3573 ||| | ||||| || | ||||||| | ||||||||||||| || || Sbjct 8178 CGGCGGCGAAGGCGGCGGGCCGAAAGGTCACCATTCACATCGACGGCCTCGCCGCTTCCA 8237 Query 3574 CAGCGAGCTTCATCGCGATGGCCGGCGACGAGATCGTGATGAATCGCAACGCGGAGATGA 3633 ||| | ||||||| ||||| |||||||||||| | ||| |||||| ||||| Sbjct 8238 TGGCGTCCGTCATCGCCATGGCAGGCGACGAGATCATCATGGCCGACAACGCCCTGATGA 8297 Query 3634 TGATTCACGACGCCTCCGGTGTGTGCATCGGCAACGC 3670 |||||||| | | | | |||| ||||||| |||| Sbjct 8298 TGATTCACAATCCGTGGGATGTGGCCATCGGCGACGC 8334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153088071555924