Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031262.1 Length=54751 Score E Sequences producing significant alignments: (Bits) Value seq1231 372 1e-98 >seq1231 Length=29534 Score = 372 bits (412), Expect = 1e-98 Identities = 651/928 (70%), Gaps = 37/928 (4%) Strand=Plus/Minus Query 40805 AACCGGTGATGCTTGGGCAG-GGCATGAACCTGCAGC---AGGCCCACGTCTGTGTCTAC 40860 ||||||||||||| |||||| |||| |||||||||| | |||| | || | | Sbjct 4094 AACCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTC 4036 Query 40861 ATCGGCGTCACGCA-CAAGTTCAACGACCTGATCCAGAGCTTGCACCGGATTCAGCGTTT 40919 ||||||| | || ||||||||||||| | |||||| | |||||| | ||||| || Sbjct 4035 GTCGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTT 3977 Query 40920 CGGCCAAACACACCCTTGCACAGCCCATCTCATCCATTCAGAAACCGAACGGGAAGTGGT 40979 | || | ||||| | | | | ||||||| | ||||| || ||||| || || Sbjct 3976 CCAGCAGTCGCACCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGT 3917 Query 40980 TCGCATCATCCGCGAGAAATGGGCCCAGCACAGAGAGCTGACATCAACTATGACTGACAT 41039 ||| | | | | ||| ||||| | ||| ||||||| | ||| | || || Sbjct 3916 GCGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGAT 3857 Query 41040 AATCCACGAATACGGGCTTGACCCCGAGG-CAATCTCGGAAGCTCTGCAACGGTCCATCG 41098 |||| |||||| || || | | || | | ||||| || || | || || |||| Sbjct 3856 CATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCG 3798 Query 41099 GATGCGAACGAATCGAAGCATCCGGCGAGGGCTGGTTGTTCGCCAACAACGACTGCGTGC 41158 | ||| || || | | ||||| |||||| | | || ||||||||||||| Sbjct 3797 GCGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCG 3738 Query 41159 CCGAAACCAAGTCCA--TGGGCGACAGCTCGGTAGATCTGATTGTCACCAGCATTCCGTT 41216 || | | || ||| ||| | ||||| || ||||| |||||| ||| ||||| Sbjct 3737 ATGAGGCT--GCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTT 3680 Query 41217 CTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAACGC 41276 | ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 3679 CAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGG 3620 Query 41277 GCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAGCTGCTGCGCATCCTTGCGCCCGG 41336 |||||||| ||||||||||| | || |||||| | ||||| || || ||||| || Sbjct 3619 GCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGG 3560 Query 41337 GCGGATCTACGCCTGC---CATGTCAAGGACCGCATCTTGTTCGGAAACGTCACCGGCGC 41393 ||| || |||||| || || |||||||| ||| ||||||| || ||||||| Sbjct 3559 CCGGCTC---GCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGA 3503 Query 41394 AGGCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGCAAACA 41450 || || || |||||| |||||||||||| || ||| ||| ||| || Sbjct 3502 GGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CA 3446 Query 41451 CGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCA 41510 ||||||| | | | | |||||||||||||| |||||||| || ||||| || |||||||| Sbjct 3445 CGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCA 3386 Query 41511 GACGTACCGGCTGGGCTGGT-CGGAGCAGTGC--AAGGACGCTACGAAGATGGGCGTCGG 41567 ||| ||||| ||| | || | | | ||| ||||||| |||||||||||| ||| Sbjct 3385 GACCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGG 3329 Query 41568 CTCGCCGGAATACATTCTGTTGTTCCACAGGCCACAGTCAGACCGGTCCAAGGGCTACGC 41627 | || |||||| | ||| || | | || ||| || ||||| || || || || Sbjct 3328 CAGCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGC 3269 Query 41628 CGACACCCCGGTCACCAAATCCAAGGACGA---TTACACTCGGGCCCGCTGGCAGGTCGA 41684 |||||| ||||||||||| || | ||| |||| | ||| || ||||||||||| Sbjct 3268 CGACACGCCGGTCACCAA--GGAACG-CGAGAGCTACAGCCTGGCGCGGTGGCAGGTCGA 3212 Query 41685 CGCGCACGCGTTCTGGCGCTCGAGCGGC 41712 ||| ||||| ||||||||||| |||||| Sbjct 3211 CGCCCACGCCTTCTGGCGCTCCAGCGGC 3184 Score = 255 bits (282), Expect = 2e-63 Identities = 285/375 (76%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 40099 TTCACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACGTAC 40158 ||||| |||||| || |||||||||||| | || |||||||||||||| ||||| | | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 40159 CAGTCGTTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACGCCA 40218 ||| ||||||| ||| ||||| | |||||| ||||| | ||||| |||||||| || Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 40219 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGTTATCTCGGGGTGATGGACACC 40278 ||||| ||||| ||||||||||||||||| ||||| |||| ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 40279 GGTGCGGCGCTCACGCGTTGGTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCT 40337 || |||||||| || | |||||||| || ||| |||||| | | |||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGA-GAAGGCGGGCGATCTCACCCT 5535 Query 40338 GTACCCACACAAGGAGCGTGAGTTCTTCTTGTGGCTCAACACCTGGGCGGCGTTCGTGCA 40397 ||||| |||||||| | ||||||| ||||||| || | |||||| | ||| |||| Sbjct 5534 CTACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCA 5475 Query 40398 ATCCCCGGCAGACCTCGG--TCA-CGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGT 40454 |||| |||||||| ||| |||| |||||| || ||||| |||| || Sbjct 5474 GCGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGT 5418 Query 40455 GCTGTGGCATGAGGT 40469 || ||||| ||||| Sbjct 5417 GCGCTGGCACGAGGT 5403 Score = 107 bits (118), Expect = 7e-19 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 42966 CTGCCCCTTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGAATCCTGGCGA 43025 ||||||| | |||||||||||||| |||||||||||| || | ||| | | ||||| Sbjct 2884 CTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATGCGCGGCGA 2825 Query 43026 GTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCG 43074 | |||||||||| |||||| |||| || |||||||||||| |||| ||| Sbjct 2824 GCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGCG 2776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175074362673786