Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_031266.1 Length=44872 Score E Sequences producing significant alignments: (Bits) Value seq1231 311 2e-80 >seq1231 Length=29534 Score = 311 bits (344), Expect = 2e-80 Identities = 595/857 (69%), Gaps = 31/857 (4%) Strand=Plus/Minus Query 38952 CCAGTGATGCTCGGGCAG-GGCATGAACCTGCAAC---AGGCGCACACCTGCGTCTACAT 39007 || |||||||| |||||| |||| |||||||| | | ||| | ||| | | | Sbjct 4092 CCGGTGATGCT-GGGCAGCGGCACCAACCTGCAGCGCCACTGCCACCGCGCCGTGTTCGT 4034 Query 39008 CGGCATCACGCA-CAAGTTCAACGATCTGATCCAGAGCTTGCACCGGATTCAGCGGTTCG 39066 |||| | | || |||||||||||| | |||||| | |||||| | ||||| ||| Sbjct 4033 CGGCGT-AGGCTTCAAGTTCAACGACTTCATCCAGGCGATCCACCGGCTCCAGCGCTTCC 3975 Query 39067 GCCAAACCCATCCCTGTACAGCCC-ATTTGATCCATTCCGAAACCGAGCGGGAAGTGGTG 39125 || | || ||| || || | | | ||||| ||||||| |||||||| || ||| Sbjct 3974 AGCAGTCGCA-CCCGGTCGAGGTCGACATCATCCACGCCGAAACTGAGCGGGAGGTCGTG 3916 Query 39126 CGGGTGATCCGCGAGAAATGGGCACAACACCGAGAGTTGACATCAACGATGACCACCATC 39185 || | | | | ||| ||||| | ||| ||| ||| | ||| || ||| Sbjct 3915 CGCGACCTGCAGGCGAAGTGGGCGCGTCACGAGGAGCTGAGCGCCCGCATGTCCGAGATC 3856 Query 39186 ATTCATGAGTACGGACTTGACCCCGAGG-CAATTTCGGAAGCGCTGCAACGCTCCATCGG 39244 || | || || || || | | || | | |||| ||||| | ||||| ||||| Sbjct 3855 ATCCGCGAATATGGCCTGCAGCATGACGTCGCCCTCGGC-GCGCTCAAGCGCTCGATCGG 3797 Query 39245 ATGCGAACGCATCGAAACATCCGGTGAGGGATGGGTGTTCGCCAACAACGACTGCGTTCA 39304 ||| || || | || || || ||| | | || ||||||||||||| | Sbjct 3796 CGTCGAGCGGCAGGAGGTCACTGGCGACGGCTGGACGCTGGCGCACAACGACTGCGTCGA 3737 Query 39305 CGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGATTGTCACCAGCATTCCGTTCTC 39364 || | | | ||| || | ||||| || ||||| |||||| ||| |||||| Sbjct 3736 TGAGGCTGCCCGGCTGGACGAAGGATCGGTCGACCTGATCGTCACCTCCATCCCGTTCAG 3677 Query 39365 CAACCACTACGAGTACACGCCGAGCTACAACGATTTCGGCCACACCGACGACAACGCGCA 39424 ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||| Sbjct 3676 CAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGATGACGGGCA 3617 Query 39425 TTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCGCCGGGCCG 39484 ||||| ||||||||||| | || || ||| | ||||| || || ||||||||||| Sbjct 3616 TTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCGCCGGGCCG 3557 Query 39485 TATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACCGGCGCCGG 39541 | |||||| |||||| |||||||| ||| ||||||| || ||||||| || Sbjct 3556 GCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACCGGCGAGGG 3500 Query 39542 CGTGCCCACCGTGTCCCCGTTTCACGCCGAGGCGATCTTCCAC---GGCCGCAAACACGG 39598 ||||| ||||| ||||| |||||| || ||| ||| ||| ||||| Sbjct 3499 TGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC---CACGG 3443 Query 39599 CTTCGACTACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAACAACCAGAC 39658 |||| | | | | ||||||||||||||||| ||||| || ||||| || ||||||||||| Sbjct 3442 CTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAACCAGAC 3383 Query 39659 GTACCGGCTGGGCTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCGTCGGCT 39714 ||||| ||| | || | ||| || ||| || |||| ||| ||||||||| |||| Sbjct 3382 CTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCTGCGGCA 3327 Query 39715 CCCCGGAATACATTCTGCTGTTCCACAAACCGCAAACAGACAGGTCCCGTGGGTATGCCG 39774 ||| |||||| | |||||| | | ||| ||||||| ||| | || || || ||||||| Sbjct 3326 GCCCCGAATACGTGCTGCTGATGCGCAAGCCGCAAAGCGACCGCTCACGCGGTTATGCCG 3267 Query 39775 ACGTACCGGTCATCAAG 39791 || ||||||| |||| Sbjct 3266 ACACGCCGGTCACCAAG 3250 Score = 284 bits (314), Expect = 3e-72 Identities = 289/374 (77%), Gaps = 6/374 (2%) Strand=Plus/Minus Query 38244 TTCACGGCCGTCTCACTCGACGAGGCGAGCGTGCTGCGCTCGTTCGGGTCCAAGACGTAC 38303 ||||| |||||| || |||||||||||| | || |||||||||||||| ||||| | | Sbjct 5773 TTCACCGCCGTCAGCCTGGACGAGGCGAGCATCCTCCGCTCGTTCGGGTCAAAGACCTTC 5714 Query 38304 CAGTCGTTCCTCGAGCTGTTCGACGGGGTGCCCTACCGGTACGTCGCCACCGCCACACCC 38363 ||| ||||||| ||| ||||| | |||||| ||||| | ||||| |||||||| ||| Sbjct 5713 CAGACGTTCCTGCCGCTATTCGAGGCGGTGCCGTACCGATTTGTCGCGACCGCCACCCCC 5654 Query 38364 TCGCCGAACCGGTACAAGGAGCTGATCCACTACGCGGGCTATCTCGGGGTGATGGACACC 38423 ||||| ||||| ||||||||||||||||| ||||| || | ||||| |||||||||||| Sbjct 5653 TCGCCCAACCGCTACAAGGAGCTGATCCATTACGCCGGTTTCCTCGGCGTGATGGACACC 5594 Query 38424 GGTGCGGCGCTCACGCGTTGGTTCCAGCGGGACTCCACGAAGGCGAACAACCTCACCCTC 38483 || |||||||| || | |||||||| || | ||||||| | | ||||||||| Sbjct 5593 GGCCAAGCGCTCACCCGCTTCTTCCAGCGCAACAGCGAGAAGGCGGGCGATCTCACCCTC 5534 Query 38484 TACCCGCATAAAGAACACGAGTTCTGGCTGTGGCTGAACACGTGGGCGGCGTTCGTGCAA 38543 |||||||| || ||||| |||||||||||||||||||| | ||||| | ||| |||| Sbjct 5533 TACCCGCACAAGGAACAAGAGTTCTGGCTGTGGCTGAATAGCTGGGCCGTTTTCCTGCAG 5474 Query 38544 TCCCCGGCAGACCTCGG--TCA-CGACGCCACCGGCTACGACCTGCCGCCGCTGGAGGTG 38600 |||| |||||||| ||| |||| ||||||||| ||||| |||| ||| Sbjct 5473 CGCCCGAGCGACCTCGGATTCAGTGACG---ACGGCTACGATCTGCCCGCGCTCACCGTG 5417 Query 38601 TTGTGGCATGAGGT 38614 ||||| ||||| Sbjct 5416 CGCTGGCACGAGGT 5403 Score = 136 bits (150), Expect = 1e-27 Identities = 206/287 (72%), Gaps = 22/287 (8%) Strand=Plus/Minus Query 40088 CCTGCCTGCCACGTTCATGGCCATCGC-CCCGGGATCGTGGTCACC-TC---ACGTGTGG 40142 |||||| ||| |||||||| ||||| ||||| | | |||| || |||||||| Sbjct 3004 CCTGCCGCGCACCTTCATGGCGATCGCGCCCGGCAGC-----CACCATCCCGACGTGTGG 2950 Query 40143 CACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAA---CGTCCAA 40199 ||||| | |||||| || | ||||| |||||| |||||| || | | Sbjct 2949 GACGACATCGTGCGGATGCAGACGCTCAACGGCGAGCAGGT---CCGCAAGGGCGCCGAG 2893 Query 40200 ATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGATCGGCTGATCACTCGTTTCTCGAAT 40259 | |||||| |||||||| |||||||||||||| || ||||||||| || | ||| | Sbjct 2892 AAGCACGTCTGCCCCCTCCAGTTCGACATCGTCGACCGGCTGATCGAGCGATACTCTATG 2833 Query 40260 CCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTG 40319 | |||||| |||||||||| |||||| |||| || |||||||||||| |||| || | Sbjct 2832 CGCGGCGAGCTGGTGTTCGATCCGTTCTGCGGCCTCGGCACCGTGCCGATGCGCGC---G 2776 Query 40320 AAACTT---GGTCGCCGCGGCCGTGGTGTCGAGCTGAATCCCGGCTA 40363 | ||| |||||||||||| || ||| || || |||| ||| Sbjct 2775 ATCCTTGCCGGTCGCCGCGGCGCCGGCAGCGAACTCAACCCCGACTA 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143462869448148