Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3158 199 8e-46 seq599 95.1 3e-14 seq3102 93.3 9e-14 seq2140 93.3 9e-14 seq381 93.3 9e-14 seq2399 87.8 4e-12 >seq3158 Length=82937 Score = 199 bits (220), Expect = 8e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| ||||| || ||||||| ||| ||||||||| ||||||||||||| Sbjct 51775 ACCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 51716 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| || ||||| || |||||||| ||||| |||||||| || || ||||| || Sbjct 51715 GAGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGG 51656 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||| || || | ||||||| | || || ||||| || | ||| || Sbjct 51655 AATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAAC 51596 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||||||||| || || || || || ||||| |||||||| Sbjct 51595 TTCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 199 bits (220), Expect = 8e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| ||||| || ||||||| ||| ||||||||| ||||||||||||| Sbjct 52177 ACCACCACGCAACCGAAGGACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 52118 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| || ||||| || |||||||| ||||| |||||||| || || ||||| || Sbjct 52117 GAGCGTCCGACCATCTTCAAGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGG 52058 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||| || || | ||||||| | || || ||||| || | ||| || Sbjct 52057 AATTCCCTCCTTGTCTTGAATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAAC 51998 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||||||||| || || || || || ||||| |||||||| Sbjct 51997 TTCTAACGTGATCGTCTTGCCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| |||||||| |||| || | ||| ||||||||| ||||| ||||| | Sbjct 51243 ACCGCCACGGAGGCGAAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGA 51184 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || ||||||||||| ||||| ||||| || Sbjct 51183 CAGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGG 51124 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || |||||||| | || || | |||||||| || || || || Sbjct 51123 AATGCCCTCCTTATCCTGGATCTTGGTCTTAACATTGTCGATAGTATCGCTAGACTCCAC 51064 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 51063 CTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCAT 51016 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||| | | |||| ||| | |||||||| || || |||||||| || | Sbjct 52405 ACCACCACGCAATCTCAAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGA 52346 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||| |||||||| || ||||| || || |||||||| | || ||||| || || Sbjct 52345 AAGCGTACGGCCATCTTCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGG 52286 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| || || ||||| ||||||| || ||| |||| || || || || | |||||| Sbjct 52285 AATACCTTCTTTATCTTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGAC 52226 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || || || ||||||| ||||| ||||| |||||||| Sbjct 52225 TTCTAACGTAATGGTTTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || || || | || |||||| |||||||| || || | Sbjct 51547 ACCACCGCGAAGACGAAGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGA 51488 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || || || |||||||||||||| ||||| || Sbjct 51487 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGG 51428 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || || ||||| | ||| || ||||||| || || |||| || || Sbjct 51427 AATGCCCTCCTTATCCTGAATCTTGGTTTTCACATTATCGATGGTATCAGAAGACTCAAC 51368 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 || || ||||| ||||| || |||| ||||| |||| || Sbjct 51367 CTCTAGGGTGATGGTCTTTCCTGTCAGGGTCTTGACGACTA 51327 >seq599 Length=174198 Score = 95.1 bits (104), Expect = 3e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 283006 CTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCG 283065 |||||||||| | || ||| | ||||| ||||| |||| ||||| ||||| ||||| | Sbjct 69710 CTTGGATCTTGGTCTTGACGTTGTCGATTGTGTCTGAAGACTCGACCTCGAGGGTGATGG 69769 Query 283066 TCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||||| | ||||| ||||| ||||||||||| Sbjct 69770 TCTTACCCGTGAGGGTCTTCACGAAGATCTGCATTTT 69806 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || || || | ||| || || |||||||| || || | Sbjct 69507 ACCACCGCGGAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCCGA 69566 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| || || || ||||| ||||| ||||| | |||||| ||||| || Sbjct 69567 GAGGGTGCGGCCGTCTTCGAGCTGTTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGGGG 69626 Query 282992 AATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 69627 GATGCCCTCCTTGTCT 69642 >seq3102 Length=369104 Score = 93.3 bits (102), Expect = 9e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 ||||||||||| || || | || || || || || || || || |||||||| ||| Sbjct 110036 TTTTGGATGTTATAATCGCTCAAAGTACGACCGTCTTCGAGCTGCTTTCCGGCAAAAATC 110095 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATC 283030 || || || ||||| || || |||||||| || |||||| |||||||| || | || Sbjct 110096 AATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGATC-TTGCTTTTCACATTGTC 110154 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | ||||| || || ||||| ||||| || || | ||||| ||||| Sbjct 110155 GATTGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAA 110214 >seq2140 Length=6806 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 ||||| || |||||||| || ||||| |||||| ||| || || || || |||||| Sbjct 1003 GACCCGTACATCAACGTGGACCCGGGCACGATGTCGCCGTTCCAGCACGGCGAGGTGTTC 1062 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 |||||||| || || || || || || ||||| |||||||||||||| || ||| Sbjct 1063 GTGACGGACGACGGCGCGGAGACGGACCTGGACCTGGGGCACTACGAGCGCTTC 1116 >seq381 Length=5565 Score = 93.3 bits (102), Expect = 9e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTC 301491 || || ||| | |||||||||||||| |||||||||||| || ||||| ||||| | Sbjct 494 GATCCGTATCTGAACGTCGATCCGGGCACGATGAGCCCGTACCAGCATGGCGAAGTCTAT 553 Query 301492 GTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547 ||||| || || || || || ||||| || ||||| || || ||||| || ||||| Sbjct 554 GTGACCGACGACGGGGCGGAGACCGACCTCGATCTTGGCCATTACGAGCGCTTCAC 609 >seq2399 Length=446898 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| |||| || | ||||| | || || || ||| | || || | |||||| Sbjct 271457 ATCATCACCGAGGCAGTTGAGATCGAGAAAGAATTCTTGACGGATGCCCTACCTTGCGCC 271398 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || | || |||||| || | |||||| | || || || || ||||| ||||| | | Sbjct 271397 CTACTTGGAATGAATTCTAAGCTCATGTGCCAGTACATTGAGTTCGTTGCTGACAGACTA 271338 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 | ||||| || || || ||||| | || ||| ||| ||||| |||| || ||||| Sbjct 271337 CTTGTGGCCCTTGGTAACAAGAAATTTTACAACGCCACCAACCCATTCGACTTCATGGAC 271278 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 |||||| | || || || ||||||||||| |||||||| | ||||| || | | Sbjct 271277 AACATTTCGTTGGCCGGTAAGACGAACTTCTTCGAGAAGCGTGTTGGTGATTACCAGAAG 271218 Query 230403 CCCGGTGT 230410 | ||||| Sbjct 271217 GCTGGTGT 271210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046692515104574