Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20niger_20[genbank_20GCA_5F001430945.1_202015-11-03] 3,481 sequences; 36,718,296 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3158 145 7e-30 seq599 116 3e-21 seq3102 93.3 4e-14 >seq3158 Length=82937 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | |||| || || ||| || || ||||||||||||||||| Sbjct 51242 CCGCCACGGAGGCGAAGAACCAAGTGGAGGGTGGATTCTTTTTGAATGTTATAGTCGGAC 51183 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||| || || |||| ||| || ||||| | ||| Sbjct 51182 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGTTGCTGGTCTGGAGGA 51123 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| || ||| ||| | | | ||| ||||| |||||||| Sbjct 51122 ATGCCCTCCTTATCCTGGATCTTGGTCTT-AACATTGTCGATAGTATCGCTAGACTCCAC 51064 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || |||| ||||| ||||||||||||||| Sbjct 51063 CTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTGACGAAAATCTGCATG 51015 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| |||||| ||||| |||||||||||||| || ||||| || || || | || Sbjct 52389 AAAACCAAATGCAGAGTGCTTTCCTTCTGAATGTTGTAATCGGAAAGCGTACGGCCATCT 52330 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 ||||| ||||| || || || || || |||||||| || | |||| | || ||| | Sbjct 52329 TCGAGTTGCTTTCCAGCAAAGATGAGTCGCTGTTGATCTGGTGGAATAC-CTTCTTTATC 52271 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | |||| | |||| | | || || ||| || || || | ||| || || Sbjct 52270 TTGAATCTTTGTCTTAACGTTATCAATGGTATCTGACGATTCGACTTCTAACGTAATGGT 52211 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| |||||||| ||||| ||||| |||||||| Sbjct 52210 TTTTCCCGTCAGGGTCTTCACGAAGATCTGCAT 52178 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| || || |||||||| ||||| ||||| || || | || || Sbjct 51756 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 51697 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || || ||||||||||| |||| ||||| ||||| | |||| | |||||||| | || Sbjct 51696 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTG 51638 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | |||| | || ||| | | | |||||| || || || || | ||| ||||| || Sbjct 51637 AATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTT 51578 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | || || |||||||||||||| Sbjct 51577 GCCGGTTAAGGTTTTCACGAAAATCTGCAT 51548 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| || || |||||||| ||||| ||||| || || | || || Sbjct 52158 ACAAGATGTAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAGAGCGTCCGACCATCTTCA 52099 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || || ||||||||||| |||| ||||| ||||| | |||| | |||||||| | || Sbjct 52098 AGTTGTTTGCCGGCGAAGATCAACCGCTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTG 52040 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | |||| | || ||| | | | |||||| || || || || | ||| ||||| || Sbjct 52039 AATTTTCGTTTTTACGTTGTCAATTGTGTCGGAGGATTCAACTTCTAACGTGATCGTCTT 51980 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | || || |||||||||||||| Sbjct 51979 GCCGGTTAAGGTTTTCACGAAAATCTGCAT 51950 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || || || || ||||| |||||||| || || Sbjct 51546 CCACCGCGAAGACGAAGGACAAGGTGAAGAGTTGATTCTTTCTGGATGTTATAATCCGAA 51487 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||| ||||| |||| || || ||||| | ||| Sbjct 51486 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGAGGA 51427 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| | || | || || | | || || ||||| || Sbjct 51426 ATGCCCTCCTTATCC-TGAATCTTGGTTTTCACATTATCGATGGTATCAGAAGACTCAAC 51368 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || ||||| ||||| |||| Sbjct 51367 CTCTAGGGTGATGGTCTTTCCTGTCAGGGTCTTGACGA 51330 >seq599 Length=174198 Score = 116 bits (128), Expect = 3e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || ||||| ||||| | || || || || ||| ||||||||| |||||||| || Sbjct 69505 CCACCACCGCGGAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCC 69564 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| |||||||| ||||||||||| || || || || ||||| | | Sbjct 69565 GAGAGGGTGCGGCCGTCTTCGAGCTGTTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGG 69624 Query 41753 GGAACGCTCTCCTTGTC 41769 || | || ||||||||| Sbjct 69625 GGGATGCCCTCCTTGTC 69641 >seq3102 Length=369104 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||| || |||||||| ||| | || || |||| ||||||||||| ||||| || | Sbjct 110034 CCTTTTGGATGTTATAATCGCTCAAAGTACGACCGTCTTCGAGCTGCTTTCCGGCAAAAA 110093 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT----CAAC 41788 ||| ||||| ||||||| || | || |||||| ||| || | |||||| || Sbjct 110094 TCAATCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCCTGGA--TCTTGCTTTTCACATT 110151 Query 41789 GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 | || | |||||||||||||| ||||| | || || || || || || || ||||| Sbjct 110152 GTCG--ATTGTGTCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTG 110209 Query 41849 ACGAA 41853 ||||| Sbjct 110210 ACGAA 110214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462283883997200