Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq15 91.5 2e-13
>seq15
Length=607589
Score = 91.5 bits (100), Expect = 2e-13
Identities = 195/288 (68%), Gaps = 5/288 (2%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| || |||||||| || ||| | |||||||| ||||||||||| || ||
Sbjct 331306 ATATAGGTGTCGATGAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 331365
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| |||||||| || || | ||||||||||| | ||| || || | ||
Sbjct 331366 AAACCGTAGAAGCATCGAGCCTCAGGAATTTGAACTTCACCACTGAAGCGCTCGACAAGG 331425
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| ||||| || || || || || ||||| || || | | ||| ||||| ||
Sbjct 331426 TTCTCGTTGACAATTCCATCAGATGCTGCGAAGAATGCGAGGACATGTGAGATGAAGTAA 331485
Query 17414 TTTTCGTC--CGGT--GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTC 17469
|||||| |||| || | | ||| || | | || ||||| | ||| | |||
Sbjct 331486 CGTTCGTCATCGGTGAGTCTG-TTGTTCCAATCGTGAAGGTCCTTGGAGAGATCAATTTC 331544
Query 17470 TTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
||||| |||||| || ||| | ||||| || ||||| | ||| ||
Sbjct 331545 TTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 331592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517539040109520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |