Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq15 91.5 2e-13 >seq15 Length=607589 Score = 91.5 bits (100), Expect = 2e-13 Identities = 195/288 (68%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| || ||| | |||||||| ||||||||||| || || Sbjct 331306 ATATAGGTGTCGATGAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 331365 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| || || | ||||||||||| | ||| || || | || Sbjct 331366 AAACCGTAGAAGCATCGAGCCTCAGGAATTTGAACTTCACCACTGAAGCGCTCGACAAGG 331425 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || || || || || ||||| || || | | ||| ||||| || Sbjct 331426 TTCTCGTTGACAATTCCATCAGATGCTGCGAAGAATGCGAGGACATGTGAGATGAAGTAA 331485 Query 17414 TTTTCGTC--CGGT--GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTC 17469 |||||| |||| || | | ||| || | | || ||||| | ||| | ||| Sbjct 331486 CGTTCGTCATCGGTGAGTCTG-TTGTTCCAATCGTGAAGGTCCTTGGAGAGATCAATTTC 331544 Query 17470 TTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||||| |||||| || ||| | ||||| || ||||| | ||| || Sbjct 331545 TTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 331592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517539040109520