Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq15 86.0 6e-12 >seq15 Length=607589 Score = 86.0 bits (94), Expect = 6e-12 Identities = 194/289 (67%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| || || || || | | ||| | || ||||| |||||||| || || || Sbjct 331306 ATATAGGTGTCGATGAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 331365 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || ||||||||||||||||| | ||||| ||||| | || || || | ||| Sbjct 331366 AAACCGTAGAAGCATCGAGCCTCAGGAATTTGAACTTCACCACTGAAGCGCTCGACAAGG 331425 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCA--ATATGTGCTTAATGAAAT 16649 ||||| || || || || ||| ||| || || || || | | ||||| ||||| | Sbjct 331426 TTCTCGTTGACAATTCCATCAGATGCTGCGAAGAATGCGAGGACATGTG--AGATGAAGT 331483 Query 16650 ATTTTTCGTCAGATGTAAG---AATATGCCAATCTTTTAAATCTTTGGATATATCCACTT 16706 | ||||||| || || | | |||||| | | || ||||| | ||| | || Sbjct 331484 AACGTTCGTCATCGGTGAGTCTGTTGTTCCAATCGTGAAGGTCCTTGGAGAGATCAATTT 331543 Query 16707 CTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 |||| | ||||| ||| ||| | ||||| || ||||| | ||| || Sbjct 331544 CTTCGGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTACATCTGCCAGAT 331592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511407917822480