Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 3e-14 seq1 82.4 6e-11 >seq13 Length=665750 Score = 93.3 bits (102), Expect = 3e-14 Identities = 126/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 101680 AAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATG-GATAAACTCTC 101738 |||||||||||| ||||| | |||||| || |||||||| || ||| | | ||| || Sbjct 584664 AAGAGCATCAATATGATCGAGATAGATATGCGCATCTCCCATGACATGCGTCAGACT-TC 584606 Query 101739 CAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAA--AGAGAATAGCTAGCAAT 101796 |||| | || | | |||||||| | ||| | | ||| |||| |||||| || || Sbjct 584605 CAGGGATCAGGTCACAAACATGAGCGAGCAT--ATGGCAAAGGAGAGCATAGCTGGCGAT 584548 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACA 101847 ||| ||||| || || | |||||||||| |||| ||||||| |||||| Sbjct 584547 GTTGAATGGGACGCCAAGCCCCATATCACAGGATCGCTGATACAATTGACA 584497 >seq1 Length=1330227 Score = 82.4 bits (90), Expect = 6e-11 Identities = 123/170 (72%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 101681 AGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGAT-AAACTCTCC 101739 ||||||||||| ||||| | |||||| || |||||||| || |||| | | ||| ||| Sbjct 682101 AGAGCATCAATATGATCGAGATAGATATGCGCATCTCCCATGACATGGGTCAGACT-TCC 682159 Query 101740 AGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAA--AGAGAATAGCTAGCAATG 101797 ||| | || | | |||||||| | ||| | | ||| |||| ||||| || || Sbjct 682160 AGGGATCAGGTCACAAACATGAGCGAGCAT--ATGGCAAAGGAGAGCGTAGCTGGCGATA 682217 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACA 101847 || ||||| || || | |||||||||| |||| ||||||| ||| || Sbjct 682218 TTGAATGGGACGCCAAGCCCCATATCACAGGATCGCTGATACAATTGGCA 682267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361246735612514