Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq96 122 7e-23 seq7 107 2e-18 >seq96 Length=182788 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | |||| ||| || |||||||| ||||| ||||| | | Sbjct 166663 CCACCACGAAGACGGAGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 166604 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | | ||||| ||||| ||||| ||| |||| || | || || ||| ||| Sbjct 166603 AAGGTTCGACCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGA 166544 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||| ||| || | | ||| ||||| || |||| | Sbjct 166543 ATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCACT 166484 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||||||||| | || ||||| || |||||||| Sbjct 166483 TCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437 >seq7 Length=756160 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | |||| || || |||||||| ||||| ||||| | | Sbjct 415656 CCACCACGAAGACGGAGAACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 415597 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | | ||||| || || ||||| || |||| || | || || ||| ||| Sbjct 415596 AAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGA 415537 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || |||||| ||| || | | ||| ||||| || ||| | Sbjct 415536 ATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCACT 415477 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| ||||||||||| | || ||||| || |||||||| Sbjct 415476 TCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422253981668024