Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 4e-13 seq96 84.2 2e-11 >seq7 Length=756160 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || | || ||||| || ||||| ||| |||| || | Sbjct 415430 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACAATTACATTGGAAGTGGAATCCTCG 415489 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | |||| ||| ||| ||||| ||||| | ||| |||||| Sbjct 415490 GATACGATCGACAACGTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATCAA 415549 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || || || ||||| ||| | || ||| ||| || |||| ||||| Sbjct 415550 CAACGTCTCATTTTCGCTGGCAAGCAACTCGAGGATGGTCGAACCTTGTCCGACTACAAC 415609 Query 25215 ATTCAAAAGGAATCTACTCTTCAC 25238 || |||||||||||||| || ||| Sbjct 415610 ATCCAAAAGGAATCTACCCTGCAC 415633 >seq96 Length=182788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || | || ||||| || || || ||| ||| || | Sbjct 166437 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACAATCACATTGGAAGTGGAGTCCTCG 166496 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | | | |||| ||| ||| ||||| ||||| | ||| |||||| Sbjct 166497 GATACGATCGACAACGTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATCAA 166556 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || ||||| ||||| || | || ||| ||| || |||| ||||| Sbjct 166557 CAACGTCTCATTTTTGCTGGCAAGCAGCTCGAGGATGGTCGAACCTTGTCCGACTACAAC 166616 Query 25215 ATTCAAAAGGAATCTACTCTTCAC 25238 || ||||||||||||||||| ||| Sbjct 166617 ATCCAAAAGGAATCTACTCTGCAC 166640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410791723321796