Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq96 109 8e-19 seq7 109 8e-19 >seq96 Length=182788 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || ||||| || || || | || | || | Sbjct 166437 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACAATCACATTGGAAGTGGAGTCCTCG 166496 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || ||||||||||| ||||| || || || |||||| Sbjct 166497 GATACGATCGACAACGTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATCAA 166556 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || |||||||| || || || | |||||| ||||||| || || || || Sbjct 166557 CAACGTCTCATTTTTGCTGGCAAGCAGCTCGAGGATGGTCGAACCTTGTCCGACTACAAC 166616 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| ||| |||| || ||| | ||| | || |||||||| Sbjct 166617 ATCCAAAAGGAATCTACTCTGCACTTAGTTCTCCGTCTTCGTGGTGGTAT 166666 >seq7 Length=756160 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || ||||| || || || | || | ||| | Sbjct 415430 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACAATTACATTGGAAGTGGAATCCTCG 415489 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || ||||||||||| ||||| || || || |||||| Sbjct 415490 GATACGATCGACAACGTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATCAA 415549 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || || ||| | |||||| ||||||| || || || || Sbjct 415550 CAACGTCTCATTTTCGCTGGCAAGCAACTCGAGGATGGTCGAACCTTGTCCGACTACAAC 415609 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || |||| || ||| | ||| | || |||||||| Sbjct 415610 ATCCAAAAGGAATCTACCCTGCACTTAGTTCTCCGTCTTCGTGGTGGTAT 415659 Score = 86.0 bits (94), Expect = 9e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 ||||| || || ||||| || || || | ||| | ||| | |||||| || ||| Sbjct 415217 AAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAATCTTCTGATACCATCGACAAT 415276 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | || ||| || ||||| || || ||||| || |||||||||||| | || || || Sbjct 415277 GTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCTGATCAACAACGTCTGATCTTC 415336 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || || || ||| | |||||| | || || | || || || || || || || || Sbjct 415337 GCTGGCAAGCAACTCGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCG 415396 Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||| |||||| | ||| | || |||||||| Sbjct 415397 ACCCTGCACTTGGTTCTCCGTCTCCGTGGTGGTAT 415431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755446424595200