Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq96 100 2e-16 seq7 100 2e-16 >seq96 Length=182788 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | |||| || ||||| |||||||||||||| Sbjct 166151 CCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 166092 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||||| ||||| || || || |||||||| ||| Sbjct 166091 AGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGA 166032 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | ||||| || Sbjct 166031 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAACC 165972 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 165971 TCAAGAGTGATGGTCTTGCCGGTGA 165947 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || | ||| | |||| ||| || || |||||||||||||||| || | || Sbjct 166648 AGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCC 166589 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || |||||||| || || || || ||| | || ||||| || Sbjct 166588 TCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCT 166529 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| || | | | | |||| ||| | || || || |||| ||||| || Sbjct 166528 TGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTC 166469 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||||||||| || || ||||| ||||| Sbjct 166468 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| |||| | || || | |||||||| ||||| Sbjct 166399 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAG 166340 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || || || || ||| | | ||||||||| ||||| ||| | || | Sbjct 166339 ATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTGACATTG 166280 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | |||||||| || | |||||||| ||||||||||| || || ||| Sbjct 166279 TCGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 166220 Query 34379 A 34379 | Sbjct 166219 A 166219 >seq7 Length=756160 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | |||| || ||||| ||||||||||| || Sbjct 415144 CCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAG 415085 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||||| ||||| || || || ||||||||| || Sbjct 415084 AGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGA 415025 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | |||| ||||| || Sbjct 415024 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACC 414965 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 414964 TCAAGAGTGATGGTCTTGCCGGTGA 414940 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| |||| | || || | |||||||| ||||| Sbjct 415392 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAG 415333 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || || || || || || | | ||||||||| ||||| ||| | || | Sbjct 415332 ATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACATTG 415273 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | |||||||| || | |||||||| ||||||||||| || || ||| Sbjct 415272 TCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 415213 Query 34379 A 34379 | Sbjct 415212 A 415212 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || || |||||||||||||||| || | || || | |||||||| ||||| Sbjct 415621 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAA 415562 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 |||||| || || || || ||| | || ||||| || |||||| || | | Sbjct 415561 AATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTT 415502 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | |||| ||| | ||||| || |||| || || || |||||||||||||| || || Sbjct 415501 GTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGAC 415442 Query 34378 AAAGATCTGCAT 34389 ||||| ||||| Sbjct 415441 GAAGATTTGCAT 415430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068007435840