Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq96 100 2e-16
seq7 100 2e-16
>seq96
Length=182788
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || || ||||| | |||| || ||||| ||||||||||||||
Sbjct 166151 CCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 166092
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | |||||||| ||||| || || || |||||||| |||
Sbjct 166091 AGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGGA 166032
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | || | ||||| ||
Sbjct 166031 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAACC 165972
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | |||||||| ||||||||||
Sbjct 165971 TCAAGAGTGATGGTCTTGCCGGTGA 165947
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || | ||| | |||| ||| || || |||||||||||||||| || | ||
Sbjct 166648 AGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCC 166589
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| || |||||||| || || || || ||| | || ||||| ||
Sbjct 166588 TCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCT 166529
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| || | | | | |||| ||| | || || || |||| ||||| ||
Sbjct 166528 TGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTC 166469
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||||||||| || || ||||| |||||
Sbjct 166468 TTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437
Score = 96.9 bits (106), Expect = 2e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||||||| |||| | || || | |||||||| |||||
Sbjct 166399 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAG 166340
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || || || || || ||| | | ||||||||| ||||| ||| | || |
Sbjct 166339 ATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTGACATTG 166280
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | |||||||| || | |||||||| ||||||||||| || || |||
Sbjct 166279 TCGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 166220
Query 34379 A 34379
|
Sbjct 166219 A 166219
>seq7
Length=756160
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || || ||||| | |||| || ||||| ||||||||||| ||
Sbjct 415144 CCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAG 415085
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | |||||||| ||||| || || || ||||||||| ||
Sbjct 415084 AGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGA 415025
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | |||| ||||| ||
Sbjct 415024 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACC 414965
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | |||||||| ||||||||||
Sbjct 414964 TCAAGAGTGATGGTCTTGCCGGTGA 414940
Score = 96.9 bits (106), Expect = 2e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||||||| |||| | || || | |||||||| |||||
Sbjct 415392 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAG 415333
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || || || || || || | | ||||||||| ||||| ||| | || |
Sbjct 415332 ATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACATTG 415273
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | |||||||| || | |||||||| ||||||||||| || || |||
Sbjct 415272 TCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 415213
Query 34379 A 34379
|
Sbjct 415212 A 415212
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| || || |||||||||||||||| || | || || | |||||||| |||||
Sbjct 415621 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAA 415562
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|||||| || || || || ||| | || ||||| || |||||| || | |
Sbjct 415561 AATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTT 415502
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | |||| ||| | ||||| || |||| || || || |||||||||||||| || ||
Sbjct 415501 GTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGAC 415442
Query 34378 AAAGATCTGCAT 34389
||||| |||||
Sbjct 415441 GAAGATTTGCAT 415430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323068007435840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |