Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq155 109 1e-18 seq153 109 1e-18 >seq155 Length=79386 Score = 109 bits (120), Expect = 1e-18 Identities = 406/626 (65%), Gaps = 19/626 (3%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| ||| | | ||| || | ||| | | ||||| ||||| || |||||| Sbjct 57346 GCAATTGTCTATGACCGAGACTTCAACTACCAATACTTTGGATTCAAGACCCTGGAGCGG 57287 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || || || | |||||||| | | || || ||| |||||| | |||||| Sbjct 57286 TCATACCTTCTACGCCTCGATGGCAAAGTTGCTGAGCGCCCTCAACACATGATCATGCGA 57227 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCT--CGAGACGTACACCGGAA 248968 ||||| || || |||||| ||||| || ||| ||| ||| ||||||||||| | | Sbjct 57226 GTGGCAGTTGGAATTCACGGTGATGATATCGAG-GCG-GCTATCGAGACGTACAACTTGA 57169 Query 248969 TG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCA 249025 || || || || | || ||||| | || || |||||| ||||||||| | Sbjct 57168 TGTCCAGCAAATACT---TCACTCATGCATCTCCCACTCTCTTCTCGGCCGGTACC--CC 57114 Query 249026 ACA--ATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCAT 249083 ||| || || || ||||| || | | |||| | || ||| | | ||||| || Sbjct 57113 ACAGGCCCAACTTTCATCATGCTTCCTGATCGACATGAAGGAGGACAGTATTGACGGTAT 57054 Query 249084 TTATGACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCT 249142 || ||||||| |||| | | || | ||| || || || || || ||||||||| Sbjct 57053 CTACGACACGC-TAAAGACCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCA 56995 Query 249143 CCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATG 249202 | || || || || || | || | |||||| |||||||||||| | ||| Sbjct 56994 ACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCCGGTACAAATGGGAACTCCAATG 56935 Query 249203 GTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGC 249262 | || || ||| | || ||| ||| | |||||| || | || | |||| || Sbjct 56934 GCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCAAGATATGTCGATCAGGGTGGAA 56875 Query 249263 GC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGT 249319 | || ||| |||| ||||| || | || ||||| || ||| | || |||| Sbjct 56874 ACAAGCGTCCGGGAGCGTTTGCCATTTACCTCGAGCCATGGCATGCGGATGTCTTTGAGT 56815 Query 249320 TCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACG 249379 |||| ||| | ||||||| | || || ||| | | || || || || ||||||| Sbjct 56814 TCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAAGTTCGTGCACGCGATCTTTTCTACG 56755 Query 249380 GCCTGTGGGTCTCCGACTTGTTCATG 249405 ||||||| | |||| | |||||| Sbjct 56754 CCCTGTGGATTCCCGATCTCTTCATG 56729 >seq153 Length=80566 Score = 109 bits (120), Expect = 1e-18 Identities = 406/626 (65%), Gaps = 19/626 (3%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || |||| ||| | | ||| || | ||| | | ||||| ||||| || |||||| Sbjct 61250 GCAATTGTCTATGACCGAGACTTCAACTACCAATACTTTGGATTCAAGACCCTGGAGCGG 61191 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || || || | ||||||||| | | || || ||| |||||| | |||||| Sbjct 61190 TCATACCTTCTACGCCTCGATGGCAAGGTTGCTGAGCGCCCTCAACACATGATCATGCGA 61131 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGC--TCGAGACGTACACCGGAA 248968 ||||| || || |||||| ||||| || ||| ||| || ||||||| |||| | | Sbjct 61130 GTGGCAGTTGGAATTCACGGTGATGATATCGAG-GCG-GCTATCGAGACATACAACTTGA 61073 Query 248969 TG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCA 249025 || || || || | || || || | || || |||||| ||||||||| | Sbjct 61072 TGTCCAGCAAATTCT---TCACTCACGCATCTCCCACTCTCTTCTCGGCCGGTACC--CC 61018 Query 249026 ACA--ATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCAT 249083 ||| || || || ||||| || | | |||| | || ||| | | ||||| || Sbjct 61017 ACAGGCCCAACTTTCATCATGCTTCCTGATCGACATGAAGGAGGACAGTATTGACGGTAT 60958 Query 249084 TTATGACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCT 249142 || ||||||| |||| | | || | ||| || || || || || ||||||||| Sbjct 60957 CTACGACACGC-TAAAGACCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCA 60899 Query 249143 CCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATG 249202 | || || || || || | || | |||||| ||||||||||| | ||| Sbjct 60898 ACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCCGGTACAAATGGAAACTCCAATG 60839 Query 249203 GTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGC 249262 | || || ||| | || ||| ||| | |||||| || | | || | |||| || Sbjct 60838 GCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCAAGATACGTCGATCAGGGTGGAA 60779 Query 249263 GC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGT 249319 | || ||| |||| ||||| || | || ||||| || ||| | || |||| Sbjct 60778 ACAAGCGTCCGGGAGCGTTTGCCATCTACCTCGAGCCATGGCATGCGGATGTCTTTGAGT 60719 Query 249320 TCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACG 249379 |||| ||| | ||||||| | || || ||| | | || || || |||||||||| Sbjct 60718 TCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAAGTTCGTGCACGCGATCTCTTCTACG 60659 Query 249380 GCCTGTGGGTCTCCGACTTGTTCATG 249405 ||||||| | |||| | |||||| Sbjct 60658 CCCTGTGGATTCCCGATCTCTTCATG 60633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073752449761152