Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq7 91.5 1e-13
seq96 89.7 4e-13
seq59 86.0 5e-12
seq10 86.0 5e-12
>seq7
Length=756160
Score = 91.5 bits (100), Expect = 1e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| ||||||||||| ||||||||||| || |||||||| ||| ||| |||| | ||
Sbjct 415869 AAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCC 415810
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| ||||| || || ||||| ||||| || || ||||| || || | || ||||| |||
Sbjct 415809 TCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTATCC 415750
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| || ||||||||| |||||||||||| ||| || | || ||
Sbjct 415410 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCG 415351
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
||||| || || ||||| |||| || ||||| || ||||| | ||||||||||||
Sbjct 415350 AGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGG 415291
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | || | || ||||| | ||| || ||||||
Sbjct 415290 ATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCTTG 415231
Query 45308 CCCGTCAGAGTCTTCACAA 45326
|| || || ||||| ||||
Sbjct 415230 CCGGTGAGGGTCTTGACAA 415212
>seq96
Length=182788
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| ||||||||||| ||||||||||| || |||||||| ||| ||| |||| | ||
Sbjct 166876 AAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCC 166817
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|||| || || || || || ||||| ||||| ||||| || || | || ||||| |||
Sbjct 166816 TCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTATCC 166757
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|| || ||| || | | |||| ||| || || | || || |||
Sbjct 166756 TGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTC 166697
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || |||| |||||| || ||||| |||||
Sbjct 166696 TTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
>seq59
Length=321881
Score = 86.0 bits (94), Expect = 5e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
||||||| ||||||||||| || |||| |||| || ||||| ||||||||||| |
Sbjct 265768 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 265827
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
||| ||||| ||||| || || | |||||||||||| || || || ||
Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | |||| ||| ||||| | ||| || ||||||||||| || ||||| || |
Sbjct 265888 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 265947
Query 45327 AG 45328
||
Sbjct 265948 AG 265949
>seq10
Length=717553
Score = 86.0 bits (94), Expect = 5e-12
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
||||||| ||||||||||| || |||| |||| || ||||| ||||||||||| |
Sbjct 20116 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 20057
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
||| ||||| ||||| || || | |||||||||||| || || || ||
Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | |||| ||| ||||| | ||| || ||||||||||| || ||||| || |
Sbjct 19996 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19937
Query 45327 AG 45328
||
Sbjct 19936 AG 19935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395070317611294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |