Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq153 102 2e-16
seq155 95.1 2e-14
>seq153
Length=80566
Score = 102 bits (112), Expect = 2e-16
Identities = 426/660 (65%), Gaps = 22/660 (3%)
Strand=Plus/Plus
Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451
||| || ||||| ||| ||||||||||| | |||| ||||| || || | |||||
Sbjct 60510 ACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTAAACGTC 60569
Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508
| ||||| ||||| |||| |||||||||||| | ||| | || || |||| ||
Sbjct 60570 TGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGT-CT--CCGTTCTTCTCAAC 60626
Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAA-- 94566
| || |||||||||||| | | ||| | || ||| ||||| | || | | ||
Sbjct 60627 ACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGC--GTGCACGAACT 60684
Query 94567 TCTTCATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCA 94626
|| || || || ||||||| | ||||| || || || ||| ||||||
Sbjct 60685 TCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGC 60744
Query 94627 GAAATATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACA 94686
| |||||||| ||||| | ||||| ||| ||||| || | | | |
Sbjct 60745 TCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTGATCGACGTATCTTGCG 60804
Query 94687 GAGACGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACT----CCATGA 94742
| | ||| |||| | |||| | | || | ||| | | | ||| | || |
Sbjct 60805 GTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTTTCCATTTGTACC--GG 60862
Query 94743 CGAAATGGGGCTTCCTTTTGCCCTCAAATCA-TGAAAGTGGATGCCGAGTCCTCCAGCAG 94801
||| | || | || | |||| || || || | || || |||| |||||||||
Sbjct 60863 CGATGTAGGCC--CCGGTAGCCCG-AATTCTGTGGATGTTGAGACCGATGCCTCCAGCAT 60919
Query 94802 TCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTT 94861
|||| ||||| ||||| ||| || || || || ||||| ||||| || || || |
Sbjct 60920 TCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCT 60979
Query 94862 GAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACAATTAAACAGT 94920
| | | | |||||||| || |||||||||| |||| || || || ||
Sbjct 60980 TCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGG-GTACCGGCCGAGAAGAGA 61038
Query 94921 GTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGAT 94980
||||| || || || || || | | || ||||| | | ||||| || || | |
Sbjct 61039 GTGGGAGATGCGTGAGTGAAGAATTTGCTGGACATCAAGTTGTATGTCTCGATAGCCGCC 61098
Query 94981 TTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCA 95040
| ||| || |||||||| || || ||||| ||||| ||||||| ||||||||||||
Sbjct 61099 TCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTCA 61158
>seq155
Length=79386
Score = 95.1 bits (104), Expect = 2e-14
Identities = 176/256 (69%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| ||||||||| |||| ||||| ||||| ||| || || || || |||||
Sbjct 57000 CCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCG 57059
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGT 94904
||||| || || || | | | | | |||||||| || |||||||||| |||| ||
Sbjct 57060 TCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGG-GT 57118
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
|| || || ||||| || ||||| || || || | || ||||| | | ||
Sbjct 57119 ACCGGCCGAGAAGAGAGTGGGAGATGCATGAGTGAAGTATTTGCTGGACATCAAGTTGTA 57178
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
|| || || | | | ||| || |||||||| || || ||||| ||||| |||||
Sbjct 57179 CGTCTCGATAGCCGCCTCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCAT 57238
Query 95025 GTCCTGAGGGCGCTCA 95040
|| ||||||||||||
Sbjct 57239 GTGTTGAGGGCGCTCA 57254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989571143448370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |