Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq153 102 2e-16 seq155 95.1 2e-14 >seq153 Length=80566 Score = 102 bits (112), Expect = 2e-16 Identities = 426/660 (65%), Gaps = 22/660 (3%) Strand=Plus/Plus Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451 ||| || ||||| ||| ||||||||||| | |||| ||||| || || | ||||| Sbjct 60510 ACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTAAACGTC 60569 Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508 | ||||| ||||| |||| |||||||||||| | ||| | || || |||| || Sbjct 60570 TGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGT-CT--CCGTTCTTCTCAAC 60626 Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAA-- 94566 | || |||||||||||| | | ||| | || ||| ||||| | || | | || Sbjct 60627 ACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGC--GTGCACGAACT 60684 Query 94567 TCTTCATTACCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCA 94626 || || || || ||||||| | ||||| || || || ||| |||||| Sbjct 60685 TCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGC 60744 Query 94627 GAAATATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACA 94686 | |||||||| ||||| | ||||| ||| ||||| || | | | | Sbjct 60745 TCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTGATCGACGTATCTTGCG 60804 Query 94687 GAGACGTTAAAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACT----CCATGA 94742 | | ||| |||| | |||| | | || | ||| | | | ||| | || | Sbjct 60805 GTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTTTCCATTTGTACC--GG 60862 Query 94743 CGAAATGGGGCTTCCTTTTGCCCTCAAATCA-TGAAAGTGGATGCCGAGTCCTCCAGCAG 94801 ||| | || | || | |||| || || || | || || |||| ||||||||| Sbjct 60863 CGATGTAGGCC--CCGGTAGCCCG-AATTCTGTGGATGTTGAGACCGATGCCTCCAGCAT 60919 Query 94802 TCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTT 94861 |||| ||||| ||||| ||| || || || || ||||| ||||| || || || | Sbjct 60920 TCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCT 60979 Query 94862 GAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACAATTAAACAGT 94920 | | | | |||||||| || |||||||||| |||| || || || || Sbjct 60980 TCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGG-GTACCGGCCGAGAAGAGA 61038 Query 94921 GTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGAT 94980 ||||| || || || || || | | || ||||| | | ||||| || || | | Sbjct 61039 GTGGGAGATGCGTGAGTGAAGAATTTGCTGGACATCAAGTTGTATGTCTCGATAGCCGCC 61098 Query 94981 TTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCA 95040 | ||| || |||||||| || || ||||| ||||| ||||||| |||||||||||| Sbjct 61099 TCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTCA 61158 >seq155 Length=79386 Score = 95.1 bits (104), Expect = 2e-14 Identities = 176/256 (69%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| ||||||||| |||| ||||| ||||| ||| || || || || ||||| Sbjct 57000 CCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCG 57059 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGT 94904 ||||| || || || | | | | | |||||||| || |||||||||| |||| || Sbjct 57060 TCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGG-GT 57118 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 || || || ||||| || ||||| || || || | || ||||| | | || Sbjct 57119 ACCGGCCGAGAAGAGAGTGGGAGATGCATGAGTGAAGTATTTGCTGGACATCAAGTTGTA 57178 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || || || | | | ||| || |||||||| || || ||||| ||||| ||||| Sbjct 57179 CGTCTCGATAGCCGCCTCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCAT 57238 Query 95025 GTCCTGAGGGCGCTCA 95040 || |||||||||||| Sbjct 57239 GTGTTGAGGGCGCTCA 57254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989571143448370