Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq75 93.3 3e-14
seq15 93.3 3e-14
>seq75
Length=245354
Score = 93.3 bits (102), Expect = 3e-14
Identities = 291/446 (65%), Gaps = 10/446 (2%)
Strand=Plus/Plus
Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799
||||||| |||| ||||| || || ||||| || | || ||| || |||||| | ||
Sbjct 39083 ACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTTGCGTCTAT 39142
Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859
|||||| ||||||| || || ||||| || | | || || |||||||||||
Sbjct 39143 TTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAGTTGATCTC 39202
Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA 22919
||||| || || || ||| ||||||||||| | || || ||| || || |
Sbjct 39203 GCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCGCACTTG--AAGC-- 39258
Query 22920 ACCGTGTCAGGACGATGCACATCAAA----TCATATCTGATGCCGTTGACATTGAGACGG 22975
||||| || | | | | || || | || | || ||||| | || ||| |
Sbjct 39259 ACCGTCCAAGCAAGCAGGCCGTCCAAGATGTTATCACCGAGGCCGTCCAAATCGAGCAAG 39318
Query 22976 CTTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGA 23034
||||| ||||| || | || || |||||||| | || | ||||
Sbjct 39319 AATTCTTAACCGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAA-CGCAACTCTAATGAAG 39377
Query 23035 CTGTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTAT 23094
| ||||| |||||||||| ||||| ||||| ||||| || ||| ||| | ||
Sbjct 39378 CAATACATCGAGTTTGTTGCCGATCGTCTGCTTCTCGCCCTCGGAAATGAGAAGGTCTAC 39437
Query 23095 AACGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTC 23154
|| | |||| ||||| || |||||||| ||||| | ||| || || || ||||||
Sbjct 39438 AAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTC 39497
Query 23155 TTTGAACGCCGTGTGAGTGAATATCA 23180
|| || ||||| |||| || ||
Sbjct 39498 TTCGAGAAGCGTGTCGGTGACTACCA 39523
>seq15
Length=607589
Score = 93.3 bits (102), Expect = 3e-14
Identities = 291/446 (65%), Gaps = 10/446 (2%)
Strand=Plus/Minus
Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799
||||||| |||| ||||| || || ||||| || | || ||| || |||||| | ||
Sbjct 331135 ACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTTGCGTCTAT 331076
Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859
|||||| ||||||| || || ||||| || | | || || |||||||||||
Sbjct 331075 TTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAGTTGATCTC 331016
Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAA 22919
||||| || || || ||| ||||||||||| | || || ||| || || |
Sbjct 331015 GCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCGCACTTG--AAGC-- 330960
Query 22920 ACCGTGTCAGGACGATGCACATCAAA----TCATATCTGATGCCGTTGACATTGAGACGG 22975
|||| || | | | | || || | || | || ||||| || || ||| |
Sbjct 330959 ACCGCCCAAGCAAGCAGGCCGTCCAAGCTGTTATCACCGAGGCCGTCGAAATCGAGCAAG 330900
Query 22976 CTTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGA 23034
||||| ||||| || | || || |||||||| | || | ||||
Sbjct 330899 AATTCTTAACCGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAA-CGCAACTCTCATGAAG 330841
Query 23035 CTGTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTAT 23094
| ||||| | |||||||| ||||| |||||| |||||| || | | ||| | ||
Sbjct 330840 CAATACATCGAATTTGTTGCCGATCGTCTGCTCCTTGCCCTCGGAAACGAGAAGGTCTAC 330781
Query 23095 AACGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTC 23154
|| | |||| ||||| || |||||||| ||||| | ||| || || || ||||||
Sbjct 330780 AAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTC 330721
Query 23155 TTTGAACGCCGTGTGAGTGAATATCA 23180
|| || ||||| |||| || ||
Sbjct 330720 TTCGAGAAGCGTGTCGGTGACTACCA 330695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356229197620642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |