Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq96 100 2e-16
seq7 87.8 1e-12
>seq96
Length=182788
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| ||||| || | || ||||| || | ||||||||||||||| | |||||||||
Sbjct 166892 GCCGCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCT 166833
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
||| || || | || ||||| || || || ||||| ||||||||||| || || | ||
Sbjct 166832 CAAGGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGG 166773
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||||| || || |||| || || || ||| |||||| | ||| ||
Sbjct 166772 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 166713
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| || || || ||||| || | ||| || || || || |||||
Sbjct 166712 TTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
>seq7
Length=756160
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||||||||| || | || ||||| || | ||||||||||||||| | |||||||||
Sbjct 415885 GCCTCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCT 415826
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
||| || || | || || | ||| || || || || |||||||| || || || | ||
Sbjct 415825 CAAGGTGCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGG 415766
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||||| || || |||| || || || ||| |||||| | ||| ||
Sbjct 415765 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 415706
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| || || || ||||| || | || || || || || |||||
Sbjct 415705 TTCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381364886986812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |