Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq96 116 9e-21
seq7 104 5e-17
>seq96
Length=182788
Score = 116 bits (128), Expect = 9e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || ||||| || | |||| ||| || || || || || |||
Sbjct 166633 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTGCTTGCCA 166574
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | |||||||| || || || ||||| ||||| |||||||||| |||
Sbjct 166573 GCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTG 166514
Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||||| | ||| || || || | ||| || ||||| || || || ||
Sbjct 166513 ACGTTGTCGATCGTATC-CGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGT 166455
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 166454 CTTGACGAAGATTTGCAT 166437
Score = 89.7 bits (98), Expect = 1e-12
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | || || || ||||| || |||
Sbjct 166405 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCA 166346
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||||||||||| || || || || || || || ||||| | ||
Sbjct 166345 GCGAAGATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTG 166286
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || | ||| ||||| || || || ||||| || || || ||
Sbjct 166285 ACATTGTCGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 166226
Query 104543 TTTACAA 104549
|| ||||
Sbjct 166225 TTGACAA 166219
>seq7
Length=756160
Score = 104 bits (114), Expect = 5e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | || || || ||||| || |||
Sbjct 415398 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCA 415339
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | |||||||||||||| || || || || || || ||||| | ||
Sbjct 415338 GCGAAGATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTG 415279
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | |||||| || ||| ||||| || || || ||||| || || || ||
Sbjct 415278 ACATTGTCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 415219
Query 104543 TTTACAA 104549
|| ||||
Sbjct 415218 TTGACAA 415212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151383441175912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |