Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq96 105 6e-18 seq7 95.1 1e-14 >seq96 Length=182788 Score = 105 bits (116), Expect = 6e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || ||||||| ||||||||||||||| | ||| || ||| || || ||| || ||||| Sbjct 166645 ACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACA-AG-GTTCGACCATCCT 166588 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || || |||| || | | ||| ||||| || ||||| ||||| || || | Sbjct 166587 CGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTT 166528 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| |||| |||||| | ||| || || | | || || || | ||||| || | Sbjct 166527 GAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCT 166468 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || ||||| || || ||||| ||||| Sbjct 166467 TGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||||| ||| |||||||| | ||| |||||||||| ||| | Sbjct 166879 CGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCA 166820 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| || || ||||||| |||| ||||| || || || || ||||| || Sbjct 166819 TCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTA 166760 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | ||| || | | | ||||| | || || || | ||||| Sbjct 166759 TCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATT 166700 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| | ||| || || ||||||||||| Sbjct 166699 GTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665 >seq7 Length=756160 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||||| ||| |||||||| | ||| |||||||||| ||| | Sbjct 415872 CGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCA 415813 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || || || | ||||| |||| |||||| || || || || ||||| || Sbjct 415812 TCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTA 415753 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | ||| || | | | ||||| | || || || | ||||| Sbjct 415752 TCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATT 415693 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| | || || || ||||||||||| Sbjct 415692 GTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || ||||||| |||||||||||||| | ||| || ||| || || ||| || ||||| Sbjct 415638 ACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACA-AG-GTTCGACCATCCT 415581 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || || || | || || | | ||| ||||| || ||||| ||||| || || | Sbjct 415580 CGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTT 415521 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| |||| |||||| | ||| || || | | || || || | || || || | Sbjct 415520 GAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCT 415461 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || ||||| || || ||||| ||||| Sbjct 415460 TGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285517909040