Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq96 105 6e-18
seq7 95.1 1e-14
>seq96
Length=182788
Score = 105 bits (116), Expect = 6e-18
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|| ||||||| ||||||||||||||| | ||| || ||| || || ||| || |||||
Sbjct 166645 ACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACA-AG-GTTCGACCATCCT 166588
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||| || || |||| || | | ||| ||||| || ||||| ||||| || || |
Sbjct 166587 CGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTT 166528
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| |||| |||||| | ||| || || | | || || || | ||||| || |
Sbjct 166527 GAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCT 166468
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || ||||| || || ||||| |||||
Sbjct 166467 TGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| |||||||||| ||| |||||||| | ||| |||||||||| ||| |
Sbjct 166879 CGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCA 166820
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| ||| || || ||||||| |||| ||||| || || || || ||||| ||
Sbjct 166819 TCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTA 166760
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||| || | | | ||||| | || || || | |||||
Sbjct 166759 TCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATT 166700
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | ||| || || |||||||||||
Sbjct 166699 GTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
>seq7
Length=756160
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| |||||||||| ||| |||||||| | ||| |||||||||| ||| |
Sbjct 415872 CGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCA 415813
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || || || || | ||||| |||| |||||| || || || || ||||| ||
Sbjct 415812 TCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTA 415753
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||| || | | | ||||| | || || || | |||||
Sbjct 415752 TCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATT 415693
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | || || || |||||||||||
Sbjct 415692 GTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658
Score = 87.8 bits (96), Expect = 2e-12
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|| ||||||| |||||||||||||| | ||| || ||| || || ||| || |||||
Sbjct 415638 ACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACA-AG-GTTCGACCATCCT 415581
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| || || || || | || || | | ||| ||||| || ||||| ||||| || || |
Sbjct 415580 CGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTT 415521
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| |||| |||||| | ||| || || | | || || || | || || || |
Sbjct 415520 GAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCT 415461
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || ||||| || || ||||| |||||
Sbjct 415460 TGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448285517909040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |