Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq26 113 7e-21
seq67 111 2e-20
seq44 107 3e-19
seq58 95.1 2e-15
>seq26
Length=491941
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| ||| |||||| || |||||||| || ||||| ||||| || ||
Sbjct 237490 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACGAAGCCTGCGAT 237432
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||| |||||||||||||| || |||||| ||||||
Sbjct 237431 CCGTCGTCTTGCTCGTCGTGGTGGTGTGAAGCGTATCTCTG 237391
>seq67
Length=274343
Score = 111 bits (122), Expect = 2e-20
Identities = 123/164 (75%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| ||||| |||| | |||| |||||| || || |||| |||||
Sbjct 84042 TGATCTACGAGGAGACTCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATG 84101
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||| ||||| || || ||||||||||||||| | ||| | ||||| |
Sbjct 84102 CCGTCACCTACACCGAACACGCCAAGCGCAAGACTGTCACCTCCCTCGATGTTGTCTACG 84161
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || ||||||||||||| | || ||||| || |||||
Sbjct 84162 CTCTCAAGCGTCAAGGCCGTACCCTCTACGGTTTCGGTGGTTAA 84205
Score = 109 bits (120), Expect = 9e-20
Identities = 85/99 (86%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 83878 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 83936
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| |||||||||||||| ||||||||| ||||
Sbjct 83937 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 83975
>seq44
Length=385716
Score = 107 bits (118), Expect = 3e-19
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| ||||| |||| | |||| |||||| || || |||| |||||
Sbjct 197090 TGATCTACGAGGAGACTCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATG 197149
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||| ||||| || || ||||| ||||||||| | ||| | ||||| |
Sbjct 197150 CCGTCACCTACACCGAACACGCCAAGCGCAAGACCGTCACCTCCCTCGATGTTGTCTACG 197209
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || ||||||||||||| | || ||||| || |||||
Sbjct 197210 CTCTCAAGCGTCAAGGCCGTACCCTCTACGGTTTCGGTGGTTAA 197253
Score = 100 bits (110), Expect = 4e-17
Identities = 80/94 (85%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 196929 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 196987
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
| | ||||| |||||||||||||| |||||||||
Sbjct 196988 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 197021
>seq58
Length=324706
Score = 95.1 bits (104), Expect = 2e-15
Identities = 69/80 (86%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
|||||| || |||||||| || ||||| ||||| || ||||||||||| |||||||||||
Sbjct 252712 TCTTCGTGACAACATCCAGGGTATCACGAAGCCTGCGATCCGTCGTCTTGCTCGTCGTGG 252771
Query 16513 TGGAGTCAAGCGTGTCTCTG 16532
||| || |||||| ||||||
Sbjct 252772 TGGTGTGAAGCGTATCTCTG 252791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074272892702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |