Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq153 120 3e-22
seq155 102 8e-17
>seq153
Length=80566
Score = 120 bits (132), Expect = 3e-22
Identities = 429/656 (65%), Gaps = 25/656 (4%)
Strand=Plus/Plus
Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297
||| ||||| |||||| || ||||| || ||||||| || | || || | |||
Sbjct 60513 CTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTA---AACGTC 60569
Query 148298 T---AAACCGGGACACTCGTCGGGGCACATCAATGACCATT-TCCCTCCTGTCTTTACCC 148353
| | ||||| || |||| ||||||||||| | ||| | ||| | || ||| || |
Sbjct 60570 TGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCT-TCTCAACAC 60628
Query 148354 TCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCT 148413
|||||| || ||||| || |||||| ||| | | |||||||| || | ||||
Sbjct 60629 GCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCACGAACTTCCT 60688
Query 148414 CGGCACCCATATTGCGCTTT---AGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCT 148470
| || || | |||| || || | || ||| || || || ||||| ||||
Sbjct 60689 CTTTTCC---ATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCT 60745
Query 148471 CGATGTATACGGTCATGGCGCCTTTCC---TTTTACCTCCTTGATCGACATGGCGTAGCA 148527
||| ||| | || | || || | | || || || |||||||| | | |
Sbjct 60746 CGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTGATCGACGTATCTTGCGG 60805
Query 148528 TGCTATTAAAAACACGCAATGCA-GGTCCCAATCCCGCCGCAGTT-CCGTTTGTGGATTC 148585
|| | || || || || | ||| || | |||| || | |||| || ||||| |
Sbjct 60806 TGTTGTTGAAGACTCGGA--GCATGGGCACAATGCCATTGGAGTTTCCATTTGTACCGGC 60863
Query 148586 AATTTTACTATTGGTGGCGCGAATT-TGAGTGACATTCAGGCCGATGCCGCCTCCGTGTT 148644
|| | ||| || |||||| || | || || || |||||||| || | | |
Sbjct 60864 GATGTAGGCCCCGGTAGCCCGAATTCTGTG-GATGTTGAGACCGATGCCTCCAGCATTCT 60922
Query 148645 TAGATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAA 148704
| || ||||| ||||| || || || | ||||| |||| |||||||||||| | |
Sbjct 60923 TTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCA 60982
Query 148705 TGTTAAGCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTG 148764
||| | |||| |||| ||||| | ||| | | | | || | ||| || ||||| |
Sbjct 60983 TGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGG 61042
Query 148765 GACTAGCGTGAGTGAACAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCG 148823
|| ||||||||||| | ||||| | |||||| | || | |||||||| |||
Sbjct 61043 GAGATGCGTGAGTGAAGA-ATTTGCTGGACATCAAGTTGTATGTCTCGATAGCCGCCTCG 61101
Query 148824 ATGTCATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTC 148879
|| |||||||| ||||| | || || ||||| | |||||||||||| | |||
Sbjct 61102 ATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 61157
>seq155
Length=79386
Score = 102 bits (112), Expect = 8e-17
Identities = 196/284 (69%), Gaps = 4/284 (1%)
Strand=Plus/Plus
Query 148598 GGTGGCGCGAATT-TGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGG 148656
||| || |||||| || | || || || |||||||| || | | || || ||||| |
Sbjct 56972 GGTAGCCCGAATTCTGTG-GATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTG 57030
Query 148657 CACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGT 148716
|||| || || || | ||||| |||| |||||||||||| | |||| | ||||
Sbjct 57031 CACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGA 57090
Query 148717 AGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAG 148776
|||| ||||| | ||| | | | | || | ||| || ||||| ||| || ||||
Sbjct 57091 AGCATGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAG 57150
Query 148777 TGAACAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCA 148835
|||| ||||| | |||||| | || | |||||||| ||||| ||||||||
Sbjct 57151 TGAA-GTATTTGCTGGACATCAAGTTGTACGTCTCGATAGCCGCCTCGATATCATCACCG 57209
Query 148836 TGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTC 148879
||||| | || || ||||| | |||||||||||| | |||
Sbjct 57210 TGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 57253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478656332954080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |