Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq153 120 3e-22 seq155 102 8e-17 >seq153 Length=80566 Score = 120 bits (132), Expect = 3e-22 Identities = 429/656 (65%), Gaps = 25/656 (4%) Strand=Plus/Plus Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 ||| ||||| |||||| || ||||| || ||||||| || | || || | ||| Sbjct 60513 CTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACTCATCCCCGTA---AACGTC 60569 Query 148298 T---AAACCGGGACACTCGTCGGGGCACATCAATGACCATT-TCCCTCCTGTCTTTACCC 148353 | | ||||| || |||| ||||||||||| | ||| | ||| | || ||| || | Sbjct 60570 TGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCT-TCTCAACAC 60628 Query 148354 TCTTCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCT 148413 |||||| || ||||| || |||||| ||| | | |||||||| || | |||| Sbjct 60629 GCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCACGAACTTCCT 60688 Query 148414 CGGCACCCATATTGCGCTTT---AGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCT 148470 | || || | |||| || || | || ||| || || || ||||| |||| Sbjct 60689 CTTTTCC---ATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCT 60745 Query 148471 CGATGTATACGGTCATGGCGCCTTTCC---TTTTACCTCCTTGATCGACATGGCGTAGCA 148527 ||| ||| | || | || || | | || || || |||||||| | | | Sbjct 60746 CGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTGATCGACGTATCTTGCGG 60805 Query 148528 TGCTATTAAAAACACGCAATGCA-GGTCCCAATCCCGCCGCAGTT-CCGTTTGTGGATTC 148585 || | || || || || | ||| || | |||| || | |||| || ||||| | Sbjct 60806 TGTTGTTGAAGACTCGGA--GCATGGGCACAATGCCATTGGAGTTTCCATTTGTACCGGC 60863 Query 148586 AATTTTACTATTGGTGGCGCGAATT-TGAGTGACATTCAGGCCGATGCCGCCTCCGTGTT 148644 || | ||| || |||||| || | || || || |||||||| || | | | Sbjct 60864 GATGTAGGCCCCGGTAGCCCGAATTCTGTG-GATGTTGAGACCGATGCCTCCAGCATTCT 60922 Query 148645 TAGATATCATGGCACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAA 148704 | || ||||| ||||| || || || | ||||| |||| |||||||||||| | | Sbjct 60923 TTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCA 60982 Query 148705 TGTTAAGCAGGTAGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTG 148764 ||| | |||| |||| ||||| | ||| | | | | || | ||| || ||||| | Sbjct 60983 TGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGG 61042 Query 148765 GACTAGCGTGAGTGAACAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCG 148823 || ||||||||||| | ||||| | |||||| | || | |||||||| ||| Sbjct 61043 GAGATGCGTGAGTGAAGA-ATTTGCTGGACATCAAGTTGTATGTCTCGATAGCCGCCTCG 61101 Query 148824 ATGTCATCACCATGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTC 148879 || |||||||| ||||| | || || ||||| | |||||||||||| | ||| Sbjct 61102 ATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 61157 >seq155 Length=79386 Score = 102 bits (112), Expect = 8e-17 Identities = 196/284 (69%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 148598 GGTGGCGCGAATT-TGAGTGACATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGG 148656 ||| || |||||| || | || || || |||||||| || | | || || ||||| | Sbjct 56972 GGTAGCCCGAATTCTGTG-GATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTG 57030 Query 148657 CACAATCGTTGAGTGTTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGT 148716 |||| || || || | ||||| |||| |||||||||||| | |||| | |||| Sbjct 57031 CACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGA 57090 Query 148717 AGCACGATGACATTTGAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAG 148776 |||| ||||| | ||| | | | | || | ||| || ||||| ||| || |||| Sbjct 57091 AGCATGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAG 57150 Query 148777 TGAACAGCTTTGCCCG-CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCA 148835 |||| ||||| | |||||| | || | |||||||| ||||| |||||||| Sbjct 57151 TGAA-GTATTTGCTGGACATCAAGTTGTACGTCTCGATAGCCGCCTCGATATCATCACCG 57209 Query 148836 TGAATCTGTAGAGCTACACGCATCAGCATGTGTTGAGGCCTCTC 148879 ||||| | || || ||||| | |||||||||||| | ||| Sbjct 57210 TGAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 57253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656332954080