Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq153 322 1e-82 seq155 178 3e-39 seq13 86.0 2e-11 seq1 86.0 2e-11 >seq153 Length=80566 Score = 322 bits (356), Expect = 1e-82 Identities = 1166/1792 (65%), Gaps = 37/1792 (2%) Strand=Plus/Minus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCT-CGTATCAATGGTGATATT 363444 ||| ||| |||| ||||| ||||| || ||||| ||| || || |||| | || Sbjct 61218 ATACTTT-GGATTCAAGACCCTGGAGCGGTCATACCT-TCTACGCCTCGATGGCAAGGTT 61161 Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504 | ||| ||||| || || ||| | ||||| || || |||| || || | ||| | Sbjct 61160 GCTGAGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATC 61101 Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACG 363561 || || || || || ||||| || ||| | || || | | ||||| ||||| | Sbjct 61100 GAGGCGGCTATCGAGACATACAA-CTTG-ATGTCCAGCAAAT-TCTTCACTCACGCATCT 61044 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 || || | | | || || || | | | || | || || ||||| || | | Sbjct 61043 CCCACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGAC 60984 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| || || || ||||||| ||||| || |||| ||||| | || || Sbjct 60983 ATGAAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCA 60924 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 |||||||| || || || ||| | ||||||| |||| || || | | |||| Sbjct 60923 AAGAATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCT-ACAT 60865 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| ||| ||| |||| ||||| | || |||||||| || || || |||| || Sbjct 60864 CGCCGGTACAAATGGAAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACAC 60805 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || || |||||||| ||||||||| ||||| || |||||||| || || ||||| Sbjct 60804 CGCAAGATACGTCGATCAGGGTGGAAACAAGCGTCCGGGAGCGTTTGCCATCTACCTCGA 60745 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| ||||| ||| | |||||||| ||||| ||||| || ||| ||||||||||| Sbjct 60744 GCCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGA 60685 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | | |||||||| ||||| ||||| || || ||| || | || | || |||||||| || Sbjct 60684 AGTTCGTGCACGCGATCTCTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGT 60625 Query 363981 GGAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 || | || || | ||| | || | ||||| ||||||| || || || | || | Sbjct 60624 TGA-GAAGAACGGAGACTGGACTCTGATGTGCCCCAACGAATGCCCCGGCCTGGCAGACG 60566 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 | | || || || | | ||||| ||||| || || || || || |||| ||| | Sbjct 60565 TTTACGGGGATGAGTTCGAGGCTCTCTACGAGAAATACGAGAGAGAAGGTAAGGGTCGCA 60506 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 |||| || || ||||| || |||| ||||| | || | || | ||||| || | Sbjct 60505 AGACTATCAAGGCTCAGAAACTCTGGTACTCCATCCTCGAGGCCCAAACCGAGACCGGGA 60446 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 |||| ||| | ||||| ||| | |||||||| ||| ||||||| || |||| || | Sbjct 60445 ACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGCAACCAGAAGAACCTGGGAA 60386 Query 364220 CAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 ||| || | || |||||| || || || ||| | || ||| | || || || ||| Sbjct 60385 CAA-TCCGAAGCTCCAACCTGTGCACAGAAATTGTGGAGTACTCTGCCCCAGATGAGGTA 60327 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACT 364332 || || || ||| | || || |||| || || | || | | || | || || Sbjct 60326 GCTGTCTGCAACTTGGCTTCTCTCGCCCTGCCAACCTTCGTTGACATGAACAACGGCACC 60267 Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGG 364390 | ||| |||| | ||| | || || | | || | | | | || || ||||| Sbjct 60266 TACGACTTCCAGAAGCTTCACGAGGTGTGCCAAGTCGTTGT-CAAG-AACCTGAACAAGA 60209 Query 364391 TTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGC 364449 | ||||| | ||||| || || |||| || || || | | || | || |||||| Sbjct 60208 TCATCGATATCAATTACTACCCTGTTCCAGAGGCTAGAAAGAGC-AACCTCCGACATCGC 60150 Query 364450 CCGATTGGTCTTGGTGTACAGGGCCTCGCTGA--CGTTTTTATGATGCTCAAGATGGCAT 364507 || || | | | ||||| || || || ||||| |||| | || | ||| | | | Sbjct 60149 CCCATCGCTGTGGGTGTTCAAGGTCTTGCTGATGCGTTCCT-TGCT-CTCCGCTTACCTT 60092 Query 364508 TTGATTCGCCTGACGCTCGTGT-TCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCC 364566 | || ||||| || || | || || || ||| | |||||||| || || ||| ||| Sbjct 60091 TCGAATCGCCCGAGGC-CAAGTACCTCAACAAGCAAATCTTTGAGACCATCTATCACGCC 60033 Query 364567 GCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGG 364626 || | ||||| ||| ||| | || || | ||| ||| || || ||||| Sbjct 60032 GCTCTCACTGCATCGGTTGAGCTTGCCAAGGTGCATGGACCTTACGAGACATACGAGGGC 59973 Query 364627 TCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA 364686 || || | ||| ||||| | |||| | || | ||| ||||||||| ||| || Sbjct 59972 TCGCCAGTATCGAAGGGAGAGCTCCAATACGACATGTGGGGTGTCACGCCTACTGACCTC 59913 Query 364687 TGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCG 364744 ||| | ||||| | ||| | | | | || | |||| ||| |||||||| ||| Sbjct 59912 TGGGATTGGGACA-GCTTAAAGCAGC-AGATTGCGCAGCACGGTGTCCGCAACTCTCTCC 59855 Query 364745 TTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCG 364804 | || |||||||| || || || ||||| || || |||||| ||||||| Sbjct 59854 TCGTGGCTCCCATGCCAACTGCCAGCACCAGTCAGATTCTGGGCTTCAACGAATGCTTCG 59795 Query 364805 AACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTA 364864 | || | || ||| |||| || || || || || | |||||||| | || || | Sbjct 59794 AGCCATACACCTCCAACATTTACTCTCGTCGTGTGCTGGCTGGAGAATTCCAAGTCGTCA 59735 Query 364865 ATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACT 364924 | | || |||||||||| ||| || || ||| ||||| |||||| ||| Sbjct 59734 ACCCTTGGCTCCTCAAGGATCTCGTGGACATGGGTCTCTGGTCTGACAACATGAAAAACC 59675 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGC 364984 |||||||| | ||| || | |||||||| || | |||| || | ||| Sbjct 59674 GCATCATCGCTGAGGGTGGCTCCATCCAGAACATCCCCAATATCCCAGCCGACATCAAGG 59615 Query 364985 CTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044 || | ||||| || || ||||| || || || || || | | ||||| || |||| Sbjct 59614 CTCTGTACAAGACGGTCTGGGAGATCTCTCAACGGACGATCGTCCAGATGGCTGCTGATC 59555 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | ||||| || || ||| ||||||| | ||| | ||||| | ||||| | Sbjct 59554 GTGGTGCCTTCATTGATCAATCCCAGTCGATGAACATCCACATGAAGGACCCAACGATGG 59495 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| | || |||||| ||| || ||||| | ||||| ||||| || Sbjct 59494 GCAAGATCACCAGCATGCACTTCACTGGCTGGAAGTTGGGTCTGAAGACCGG 59443 >seq155 Length=79386 Score = 178 bits (196), Expect = 3e-39 Identities = 272/385 (71%), Gaps = 2/385 (1%) Strand=Plus/Minus Query 363601 TCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTT 363660 || || ||||| || | | |||||||| || || || ||||||| ||||| || Sbjct 57100 TCATCATGCTTCCTGATCGACATGAAGGAGGACAGTATTGACGGTATCTACGACACGCTA 57041 Query 363661 AAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTT 363720 |||| ||||| | || || |||||||| || || || ||| | ||||||| || Sbjct 57040 AAGACCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCAACATCCACAGAATT 56981 Query 363721 CGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCAT 363779 || || || | | |||| ||| ||| || |||| ||||| | || ||||| Sbjct 56980 CGGGCTACCGGGGCCT-ACATCGCCGGTACAAATGGGAACTCCAATGGCATTGTGCCCAT 56922 Query 363780 GCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||| || || || |||| || || || || ||||| ||||||||| ||||| || Sbjct 56921 GCTCCGAGTCTTCAACAACACCGCAAGATATGTCGATCAGGGTGGAAACAAGCGTCCGGG 56862 Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899 |||||||| || || |||||||| ||||| ||| | |||||||| ||||| ||||| Sbjct 56861 AGCGTTTGCCATTTACCTCGAGCCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCG 56802 Query 363900 GAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTC 363959 || ||| |||||||||||| | |||||||| ||||| ||||| || || ||| || | Sbjct 56801 AAAGAACCATGGAAAAGAGGAAGTTCGTGCACGCGATCTTTTCTACGCCCTGTGGATTCC 56742 Query 363960 TGACCATTTTATGAAGCGCGTGGAG 363984 || | || |||||||| || ||| Sbjct 56741 CGATCTCTTCATGAAGCGTGTTGAG 56717 >seq13 Length=665750 Score = 86.0 bits (94), Expect = 2e-11 Identities = 99/129 (77%), Gaps = 6/129 (5%) Strand=Plus/Plus Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATT-CAGTTGGTCTTGTCGA 111478 ||||| ||||||||||| ||||||||||| || || || ||| ||| | ||| | | Sbjct 584143 GTAAAGATTTGGGATGGCAATGGATCACGCGAATTCCTGGATAGCAGAGG--CTTAAC-A 584199 Query 111479 CAACG--AAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCA 111536 || || ||| |||||||| || || || || || ||||||||||| |||||||| || Sbjct 584200 CATCGTGAAGTTGGTGATCTTGGGCCCGTCTATGGCTTTCAATGGCGACACTTTGGCGCC 584259 Query 111537 GACTACAAA 111545 || |||||| Sbjct 584260 GAGTACAAA 584268 >seq1 Length=1330227 Score = 86.0 bits (94), Expect = 2e-11 Identities = 99/129 (77%), Gaps = 6/129 (5%) Strand=Plus/Minus Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATT-CAGTTGGTCTTGTCGA 111478 ||||| ||||||||||| ||||||||||| || || || ||| ||| | ||| | | Sbjct 682621 GTAAAGATTTGGGATGGCAATGGATCACGCGAATTCCTGGATAGCAGAGG--CTTAAC-A 682565 Query 111479 CAACG--AAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCA 111536 || || ||| |||||||| || || || || || ||||||||||| |||||||| || Sbjct 682564 CATCGTGAAGTTGGTGATCTTGGGCCCGTCTATGGCTTTCAATGGCGACACTTTGGCGCC 682505 Query 111537 GACTACAAA 111545 || |||||| Sbjct 682504 GAGTACAAA 682496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303336666992948