Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq153 141 9e-29 seq7 113 4e-20 seq102 105 6e-18 seq96 105 6e-18 seq38 105 6e-18 seq59 87.8 2e-12 seq10 87.8 2e-12 >seq153 Length=80566 Score = 141 bits (156), Expect = 9e-29 Identities = 924/1457 (63%), Gaps = 57/1457 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || || || || |||| ||||||||| | || | ||| || ||| | || Sbjct 59734 TTGACGACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGC 59793 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | ||||| |||||| || ||| ||| | || || |||||| ||||| Sbjct 59794 TCGAAGCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACG 59853 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||| | || | | ||||| | |||||||||| Sbjct 59854 AGGAGAGAGTTGCGGACACCGTGCTGCGCAATCTGCTGCTTTAAGCTGTCCCAATCCCAG 59913 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCA-AAATGCCCTCG---CTGGCGGG 145293 || ||| ||| | || ||||||||||||| || | | || ||| |||||| | Sbjct 59914 AGGTCAGTAGGCGTGACACCCCACATGTCGTATTGGAGCTCTCCCTTCGATACTGGCGAG 59973 Query 145294 GCTGCCT-TGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAAC--TCGCCTC 145350 | | | || | | || ||| || ||||| |||| |||| || Sbjct 59974 CCCTCGTATGTCTCGTAAGGTCCATGCACC-----TTGGCAAGCT--CAACCGATGCAGT 60026 Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTC-ATCGC 145409 |||||| || ||| || ||||| |||||| ||||||| | | || || || Sbjct 60027 GAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCTCGGGCGA 60086 Query 145410 TCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGA 145469 | ||| | || | ||| || | || ||||| || || || || | ||||| ||| Sbjct 60087 T-TCGAAAGGTAAGCGGAGAGCAAGGAACGCATCAGCAAGACCTTGAACACCCACAGCGA 60145 Query 145470 TGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCG 145528 |||| |||||| | ||||||| | || ||| || | | ||| || ||| ||| Sbjct 60146 TGGGGCGATGTCGGAGGTTGCTCTTTCTAGCC-TCTGGAACAGGGTAGTAATTGATATCG 60204 Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTA-ATGTGCCGCAACTTTTCAAAGTC 145587 || || || |||| ||| || || | ||| | | | | | | ||| | ||||| Sbjct 60205 ATGATCTTGTTCAGGTTCTTGACAACGA-CTTGGCACACCTCGTGAAGCTTCTGGAAGTC 60263 Query 145588 AAACCGAGCC-TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646 | | ||| | || | | | || || | | ||||| || ||||| || || | Sbjct 60264 GTA-GGTGCCGTTGTTCATGTCAACGAAGGTTGGCAGGGCGAGAGAAGCCAAGTTGCAGA 60322 Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706 | || ||| || | | | ||| | || || || | ||||| ||| | | || Sbjct 60323 CAGCTACCTCATCTGGGGCAGAGTACTCCACAATTTCTGTGCACAGGTTGGAGCTTCGGA 60382 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766 | |||||||| || | ||| || || || | |||||| || ||||||||||||||| | | Sbjct 60383 TTGTTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGG 60442 Query 145767 GTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGCA 145823 | || ||||| || | ||| | ||| | || | || | ||| || Sbjct 60443 GGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGA---GTACCAGAGTTTCTGAGC----- 60494 Query 145824 CCTGCTGCTGGTAGCGGCCCT---CTTCT---TCGTATTTCCTGTAGAGCTCCTCAAACG 145877 | || | | | ||| |||| ||||| ||||||||| |||||| |||| ||| Sbjct 60495 CTTGATAGT-CTTGCGACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAACT 60553 Query 145878 CGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGC 145937 | ||||| || | ||||||||| || | |||||| |||||||| | ||| | | Sbjct 60554 CATCCCCGTAAACGTCTGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTC 60613 Query 145938 CGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC 145997 |||| | || |||| ||| || | ||| || | |||||| ||||| | | |||| Sbjct 60614 CGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGC 60673 Query 145998 GCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTC--AAATTAAGCACACT-ATAGATGT 146054 | || ||||| ||||| ||| ||| | | ||| | ||| | ||| | Sbjct 60674 GTGCACGAACTTCCTC-TTTTCCATGGTTC-TTTCGGAGGTCAAGGA-ACTCAAAGACAT 60730 Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGT 146111 |||| ||||| || || | |||| ||| | ||||| || ||| |||||||| | Sbjct 60731 CCGCATGCCATGGCTCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTGAT 60790 Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGC 146171 | |||| | | | ||||||| ||||| || | ||||||| | | ||| ||| | Sbjct 60791 CGACGTATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTTTC 60850 Query 146172 CGTTCGTAGAGTTTATTCTGGTGCCGCGGGAG--CGCACGCAATGAACATTCACGCCGAG 146229 | || ||| | || | ||| ||| || || | | || | || | |||| Sbjct 60851 CATTTGTACCGGCGATGTAG--GCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACCGAT 60908 Query 146230 ACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAAT 146289 || || | | ||| || || || ||| ||||| |||||||| |||||||| Sbjct 60909 GCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAAT 60968 Query 146290 GCTATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCC 146347 || || |||| ||| ||| ||| ||||| || | | || ||| || || || Sbjct 60969 ACTGTCCTCCTTC--ATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACCG 61026 Query 146348 GCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTT 146407 |||||||| | || || ||||| || || | ||| | | ||||| || || Sbjct 61027 GCCGAGAAGAGAGTGGGAGATGCGTGAGTGAAGAATTTGCTGGACATCAAGTTGTATGTC 61086 Query 146408 TCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGT 146467 |||||||| | | || || || || ||||| || | || || ||||||| ||||||| Sbjct 61087 TCGATAGCCGCCTCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGT 61146 Query 146468 TGGGGCCGCTCCGCCAC 146484 || || ||||| || || Sbjct 61147 TGAGGGCGCTCAGCAAC 61163 >seq7 Length=756160 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | |||||||||||| || |||||||| ||| | Sbjct 415428 CCACCACGGAGACGGAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 415369 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || |||||||| ||| |||| | ||| || || || |||||| Sbjct 415368 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 415309 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | ||||| | || |||| Sbjct 415308 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTATCAGAAGATTCGACC 415249 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 |||| ||| | ||| || ||||| || || || || Sbjct 415248 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 415214 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||| || || || | || ||||||||| |||||||||||||| Sbjct 415885 GCCTCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCT 415826 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| |||||||| ||||| || ||| |||| || || ||||||||||| || Sbjct 415825 CAAGGTGCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGG 415766 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| || || ||| || ||| | | || | || || | ||||| | Sbjct 415765 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 415706 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || | || || ||||| |||||||| Sbjct 415705 TTCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658 >seq102 Length=175646 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||||||| | |||||| ||| || || |||||||| Sbjct 56168 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGCTTGCCG 56227 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | || |||||||| || ||||| ||||| ||||| ||| || ||| Sbjct 56228 GCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTTG 56287 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||| | || | ||| | || || || || || || Sbjct 56288 ACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 56347 Query 131218 TTTACGAAAATCTGCATGACT 131238 || ||||| |||||||||||| Sbjct 56348 TTGACGAAGATCTGCATGACT 56368 >seq96 Length=182788 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||| || || || | || ||||||||| |||||||||||||| Sbjct 166892 GCCGCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCT 166833 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| | |||||| || || |||| || |||||||||||||| || Sbjct 166832 CAAGGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGG 166773 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| || || ||| || ||| | | || | || || | ||||| | Sbjct 166772 GATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAAC 166713 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || | ||| || ||||| |||||||| Sbjct 166712 TTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | |||||||||||| || |||||||| ||| | Sbjct 166435 CCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 166376 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || |||||||| ||| |||| | ||| || || || || || Sbjct 166375 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGA 166316 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | ||| |||| Sbjct 166315 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGACC 166256 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 |||| ||| | ||| || ||||| || || || || Sbjct 166255 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 166221 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || ||||| || | || || |||||||| |||||||| ||| | Sbjct 166663 CCACCACGAAGACGGAGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 166604 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| || | || | ||| || || ||||| || Sbjct 166603 AAGGTTCGACCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGA 166544 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| || || ||| | | || |||| | || | ||||| | |||||| | Sbjct 166543 ATGCCTTCCTTATC-TTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCAC 166485 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || ||||| || ||||| Sbjct 166484 TTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437 >seq38 Length=423541 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||||||| | |||||| ||| || || |||||||| Sbjct 319980 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGCTTGCCG 320039 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | || |||||||| || ||||| ||||| ||||| ||| || ||| Sbjct 320040 GCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTTG 320099 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | ||||| | || | ||| | || || || || || || Sbjct 320100 ACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 320159 Query 131218 TTTACGAAAATCTGCATGACT 131238 || ||||| |||||||||||| Sbjct 320160 TTGACGAAGATCTGCATGACT 320180 >seq59 Length=321881 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| || | ||||| |||||| || ||||| || ||| ||| Sbjct 265768 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 265827 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| || ||||| || ||||| ||| || |||| | | Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| |||||||| || | ||| | ||| || || || || || || |||| Sbjct 265888 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 265947 Query 131225 A 131225 | Sbjct 265948 A 265948 >seq10 Length=717553 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| || | ||||| |||||| || ||||| || ||| ||| Sbjct 20116 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 20057 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| || ||||| || ||||| ||| || |||| | | Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| |||||||| || | ||| | ||| || || || || || || |||| Sbjct 19996 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19937 Query 131225 A 131225 | Sbjct 19936 A 19936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006817237760