Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq7 120 2e-22
seq96 111 1e-19
>seq7
Length=756160
Score = 120 bits (132), Expect = 2e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161
|||||| ||||| || ||||||||||||||||| || |||||||| ||| || |
Sbjct 415873 ACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACC 415814
Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221
|| |||| ||| || || || || || | ||||| || || | |||| |||||| ||
Sbjct 415813 ATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTT 415754
Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281
||| || || ||||||||| | | || ||| |||||||||||||| ||
Sbjct 415753 ATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGAT 415694
Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || |||||||| || ||||| ||||||||
Sbjct 415693 TGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658
>seq96
Length=182788
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161
|||||| ||||| || ||||||||||||||||| || |||||||| ||| || |
Sbjct 166880 ACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACC 166821
Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221
|| || || || || || ||||| || | || || || || | |||| |||||| ||
Sbjct 166820 ATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTT 166761
Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281
||| || || ||||||||| | | || ||| |||||||||||||| ||
Sbjct 166760 ATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGAT 166701
Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || ||||| || || ||||| ||||||||
Sbjct 166700 TGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943060680634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |