Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq96 122 8e-23
>seq96
Length=182788
Score = 122 bits (134), Expect = 8e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||| | ||||| || | |||||| | ||||||||||| ||
Sbjct 166437 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACAATCACATTGGAAGTGGAGTCCTCG 166496
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || ||||| |||| || |||| | ||| || || ||||| ||||| || ||
Sbjct 166497 GATACGATCGACAACGTCA---AATCAAAGATTCA-AGATAAGGAAGGCATTCCCCCGGA 166552
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | |||||||| ||||| || | || |||| ||| || || ||| ||
Sbjct 166553 TCAACAACGTCTCATTTTTGCTGGCAAGCAGCTCGAGGATGGTCGAACCTTGTCCGACTA 166612
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || ||||| ||||| || || || ||||| ||
Sbjct 166613 CAACATCCAAAAGGAATCTACTCTGCACTTAGTTCT 166648
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||||||||| || || | |||||| | ||||| ||||| ||
Sbjct 166665 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATCACATTAGAAGTTGAGTCATCA 166724
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| || ||| || || ||||| || ||||| |||||
Sbjct 166725 GACACAATTGACAATGTGAAGTCCAAGATCCAGGATAAGGAAGGCATCCCACCGGACCAG 166784
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || || || || || |||| |||||| || ||||||||||
Sbjct 166785 CAGCGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGCACCTTGAGCGATTACAAC 166844
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207
|| ||||| || ||| || || || ||
Sbjct 166845 ATCCAAAAGGAGAGCACTCTGCACTTGGT 166873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433322644878410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |