Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7 140 3e-28 seq96 127 2e-24 seq102 87.8 2e-12 seq38 87.8 2e-12 >seq7 Length=756160 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | |||||| || | |||||||| ||||| |||||||| ||| Sbjct 415659 ATACCACCACGAAGACGGAGAACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCG 415600 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || ||||| || |||||| | |||||||| ||||| ||||| Sbjct 415599 GACAAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGG 415540 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||||||| ||| | | || | || || | |||||| Sbjct 415539 GGAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCC 415480 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || |||||||| ||||| || || || || ||||| Sbjct 415479 ACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | ||| || || || | || || ||||| ||||||||||||||| Sbjct 415884 CCTCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTC 415825 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||| || ||||| ||||||||| |||| | || || |||||||| || Sbjct 415824 AAGGTGCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGG 415765 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 |||||||| || || ||||| || | | |||| ||||| | || || || Sbjct 415764 ATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACT 415705 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || |||| || || || || |||||||| Sbjct 415704 TCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | || | ||||| || || || |||||||| || Sbjct 415147 ATACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCA 415088 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| || |||||||| || || ||| |||| ||||| || ||||| ||| Sbjct 415087 GAGAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGA 415028 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||||| |||||| Sbjct 415027 GGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCA 414968 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | || | || |||||||| Sbjct 414967 ACCTCAAGAGTGATGGTCTTGCCGGT 414942 >seq96 Length=182788 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | |||||| || | |||||||| ||||| |||||||| ||| Sbjct 166666 ATACCACCACGAAGACGGAGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCG 166607 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || ||||| | |||||||| ||||| ||||| Sbjct 166606 GACAAGGTTCGACCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGG 166547 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||||||| ||| | | || | || || | ||| || Sbjct 166546 GGAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCC 166487 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || |||||||| ||||| || || || || ||||| Sbjct 166486 ACTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | ||| || || || | || || ||||| ||||||||||||||| Sbjct 166891 CCGCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTC 166832 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||| || | || |||||||| |||| | ||||| |||||||| || Sbjct 166831 AAGGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGG 166772 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 |||||||| || || ||||| || | | |||| ||||| | || || || Sbjct 166771 ATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCAACT 166712 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || |||| ||| || || || |||||||| Sbjct 166711 TCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | || | ||||| || || || |||||||| ||| Sbjct 166154 ATACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCG 166095 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| || |||||||| || || ||| |||| ||||| || |||||||| Sbjct 166094 GAGAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGG 166035 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||| | |||||| Sbjct 166034 GGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCA 165975 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | || | || |||||||| Sbjct 165974 ACCTCAAGAGTGATGGTCTTGCCGGT 165949 >seq102 Length=175646 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||||||| | || ||| ||||| ||||| || || Sbjct 56168 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGCTTGCCG 56227 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || || || ||||| || || || ||||| ||||| ||||| ||| Sbjct 56228 GCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTTG 56287 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || || || || | ||| | || ||||| || || || Sbjct 56288 ACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 56347 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 56348 TTGACGAAGATCTGCATGACT 56368 >seq38 Length=423541 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||||||| | || ||| ||||| ||||| || || Sbjct 319980 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGCTTGCCG 320039 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || || || ||||| || || || ||||| ||||| ||||| ||| Sbjct 320040 GCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTTG 320099 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || || || || | ||| | || ||||| || || || Sbjct 320100 ACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 320159 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 320160 TTGACGAAGATCTGCATGACT 320180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129207926568