Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq153 295 1e-74 seq15 192 1e-43 seq75 181 2e-40 seq155 116 7e-21 >seq153 Length=80566 Score = 295 bits (326), Expect = 1e-74 Identities = 1112/1724 (65%), Gaps = 79/1724 (5%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| |||||| ||| ||| |||| | ||||| |||||||||||||| Sbjct 59392 ACGGTGAACTGGATCGGTGCGGTGGCTGCCATGGTGCGGAGGTAATACATGCCGGTCTTC 59451 Query 243797 AGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 || || ||| |||| | || ||||||| || | ||| |||| | || Sbjct 59452 AGACCCAACTT--CCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGT------TG 59503 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 |||| | | | || ||| | |||||| || || | ||||| | || | Sbjct 59504 GGTCCTTCATGTG------GATGTTCATCGACTGGGATTGATCAATGAAGGCACCACGAT 59557 Query 243915 CTGCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973 | || ||||| || || |||| | ||||| ||||| | |||||||||| | | | Sbjct 59558 CAGCAGCCATCTGGACGATCGTCCGT-TGAGAGATCTCCCAGACCGTCTTGTACAGAGCC 59616 Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033 |||| || | |||| ||||||||| | ||||| | |||||| || Sbjct 59617 TTGATGTCGGCTGGGATATTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGG 59676 Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---G 244090 | |||||| || ||| || |||| | | | || ||| || || ||| | Sbjct 59677 TTTTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGA---GGAGCCAAGGG 59733 Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150 || || || || || ||||| | |||||| || || ||| | |||| | || ||| Sbjct 59734 TTGACGACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGC 59793 Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210 |||| || || || |||||| ||||| ||||| ||||| |||||||| | ||| Sbjct 59794 TCGAAGCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACG 59853 Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA-GCTCGTTCCAGTCCCA 244269 || ||| ||| | || |||||| |||| | |||| ||| | |||||| Sbjct 59854 AGGAGAGAGTTGCGGACACCGTGC-------TGCGCAATCTGCTGCTTTAAGCTGTCCCA 59906 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 || || ||||||| | ||| ||||||||||| | || ||| ||||| Sbjct 59907 -ATCCC--AGAGGTCAGTAGGCGTGACACCCCACATGTCGTATTGGAGCTCTCCCTTCGA 59963 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCT 244388 || || ||||||||| ||| ||| || || | || ||| |||| | | | | Sbjct 59964 TACTGGCGAGCCCTCGTATGTCTCGTAAGGTCCATGCACCTTGGCAAGCTCAACCGATGC 60023 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 || ||| ||||||| ||||||||||| ||||| |||||| | || ||||| | Sbjct 60024 AGT-GAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCTCGG 60082 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | ||| || | || | | ||| | || || || || || || || | Sbjct 60083 GCGATTCGAAAGGTAAGCGGAGAGCAAGGAACGCATCAGCAAGACCTTGAACACCCACAG 60142 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 ||||||| | ||||| |||| | || || || || ||||| | ||| | Sbjct 60143 CGATGGGGCGATGTCGGAGGTTGCTCTTTCTAGCCTCTGGAACAGGGTAGTAATTGATAT 60202 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| | |||||| ||||| | | | || || ||| ||| ||| |||| Sbjct 60203 CGATGATCTTGTTCAGGTTCTTGACAACGACTTGGCACACCTCGTGAAGCTTCTGGAAGT 60262 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCT 244686 |||| || | || || | || || || |||| ||||||| Sbjct 60263 CGTAG--GT----------GCCGTTGTTCATGTCAACGAAG--GTTGGCAGGGCGAGAGA 60308 Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 |||| ||||||||| || ||||| || | | | ||||| ||||| || ||||| || Sbjct 60309 AGCCAAGTTGCAGACAGCTACCTCATCTGGGGCAGAGTACTCCACAATTTCTGTGCACAG 60368 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 ||| || ||| || ||||||| || || ||| ||| |||||| || ||||| Sbjct 60369 GTTGGAGCTTCGGATTGTTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTT 60428 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||||||||||||||| |||||||||| ||||| |||||| | || |||||| | Sbjct 60429 GTAGAGCATGAAGGGGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGAGTTT 60488 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | |||||||| ||| ||||| |||| || ||| |||||| ||| || ||||| Sbjct 60489 CTGAGCCTTGATAGTCTTGCGACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTC 60548 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTC 244984 |||||| || | || || | ||||||||||| || | |||||||| ||| || Sbjct 60549 GAACTCATCCCCGTAAACGTCTGCCAGGCCGGGGCATTCGTTG--GGGCACATCAGAGTC 60606 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 || || ||| | || || | || ||||||||| ||||| ||||| ||||| | |||| Sbjct 60607 CAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAG 60666 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 || || | | | || || ||| |||||| | || || | || |||||| Sbjct 60667 AGATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAG 60726 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 || || | ||||| ||||| | ||||| || | || || || |||||||| || ||| Sbjct 60727 ACATCCGCATGCCATGGCTCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCC 60786 Query 245165 TGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224 || || || || || |||||||| || || | ||||| ||||| || ||| Sbjct 60787 TGATCGACGTATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAG 60846 Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCC-----CTGAGGTTGCTGATGGAC 245278 | || || || || ||||||||| || | |||| ||| || || ||| ||| Sbjct 60847 TTTCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGA--GAC 60904 Query 245279 --ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336 |||||| || || | ||| ||||| | || ||| |||| | ||||| | Sbjct 60905 CGATGCCT------CCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGA 60958 Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TG 245395 | || || || |||||| |||||||| || ||| ||||| || || || |||| || || Sbjct 60959 TACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTG 61018 Query 245396 GGG--CTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 ||| | | ||| ||| |||||||| ||||| || ||| Sbjct 61019 GGGTACCGGCCGA---GAAGAGAGTGGGAGATGCGTGAGTGAAG 61059 >seq15 Length=607589 Score = 192 bits (212), Expect = 1e-43 Identities = 368/521 (71%), Gaps = 21/521 (4%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 || ||||| ||||||||||| |||||||| ||| ||||| || | | || | | || Sbjct 331203 CCTTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAG-GACAAGAACTCTAC 331145 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 |||| | | | || || || ||| | || ||||| || ||||| ||| || |||| Sbjct 331144 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 331085 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || || || |||||| | ||| || |||| | ||||||||||||||||||||| |||| Sbjct 331084 TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCT-GATGCCCGGACTCACCTTCTCAAACG 331026 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | | ||| | || ||||| || || | |||||||| ||||| || |||||| | Sbjct 331025 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---C 330969 Query 42871 ACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 || | | |||| |||| | ||| || |||| || | ||||| |||||||| || Sbjct 330968 ACTTGAAGCAC-CGCCCAAGCAAGCAGGCCGTCCAAGCTGTTATCACCGAGGCCGTCGAA 330910 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGA 42988 |||||| | || ||| | || || | || || ||| | || |||| ||||| | | | Sbjct 330909 ATCGAGCAAGAATTCTTAACCGAGGCCCTTCCTTGTG-CTCTTCTCGGTATGAA-CGCAA 330852 Query 42989 C-CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCT--GTGCCAGATGGGTC 43044 | |||||| |||| |||||| | | || ||||| | ||| || |||| | || Sbjct 330851 CTCTCATGAAGCAA-TACATCGAATTTGTTGCCGATCGTCTGCTCCTTGCC--CTCGGAA 330795 Query 43045 TC-AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAG 43103 | || | ||||||| | | ||| |||||||| |||||||||||||| | | Sbjct 330794 ACGAGAAG-GTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCT 330736 Query 43104 GGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 |||||||||||||| ||||||||||| |||| |||||||| Sbjct 330735 GGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 330695 >seq75 Length=245354 Score = 181 bits (200), Expect = 2e-40 Identities = 361/518 (70%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 |||||||| ||||||||||| |||||||| ||| ||||| || | | || | | || Sbjct 39015 CCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAG-GACAAGAACTCTAC 39073 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 |||| | | | || || || ||| | || ||||| || ||||| ||| || |||| Sbjct 39074 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 39133 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || || || |||||| | ||| || |||| | ||||||||||||||||||||| |||| Sbjct 39134 TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCT-GATGCCCGGACTCACCTTCTCAAACG 39192 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | | ||| | || ||||| || || | |||||||| ||||| || |||||| | Sbjct 39193 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---C 39249 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 || | | |||| || ||| || |||| | | ||||| |||||||| | | Sbjct 39250 ACTTGAAGCACCGTCCAAGCAAGCAGGCCGTCCAAGATGTTATCACCGAGGCCGTCCAAA 39309 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989 ||||| | || ||| | || || | || || ||| | || |||| ||||| | | || Sbjct 39310 TCGAGCAAGAATTCTTAACCGAGGCCCTTCCTTGTG-CTCTTCTCGGTATGAA-CGCAAC 39367 Query 42990 -CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTC 43046 || ||| |||| |||||| ||| || ||||| | ||| | | | | || | Sbjct 39368 TCTAATGAAGCAA-TACATCGAGTTTGTTGCCGATCGTCTGCTTCTCGCCCTCGGAAATG 39426 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 || | ||||||| | | ||| |||||||| |||||||||||||| | | ||| Sbjct 39427 AGAAG-GTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGC 39485 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| ||||||||||| |||| |||||||| Sbjct 39486 AAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 39523 >seq155 Length=79386 Score = 116 bits (128), Expect = 7e-21 Identities = 455/703 (65%), Gaps = 37/703 (5%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| |||||| ||| ||| |||| | ||||| |||||||||||||| Sbjct 55895 ACGGTGAACTGGATCGGTGCGGTGGCTGCCATGGTGCGGAGGTAATACATGCCGGTCTTC 55954 Query 243797 AGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 || || ||| |||| | || ||||||| || | ||| |||| | || Sbjct 55955 AGACCCAACTT--CCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGT------TG 56006 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 |||| |||| | || ||| | |||||| || || | ||||| | || | Sbjct 56007 GGTC--CCTC----ATGTGGATGTTCATCGACTGGGATTGATCAATGAAGGCACCACGAT 56060 Query 243915 CTGCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973 | || ||||| || || |||| | ||||| ||||| | |||||||||| | | | Sbjct 56061 CAGCAGCCATCTGGACGATCGTCCGT-TGAGAGATCTCCCAGACCGTCTTGTACAGAGCC 56119 Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033 |||| || | |||| ||||||||| | ||||| | |||||| || Sbjct 56120 TTGATGTCGGCTGGGATATTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGG 56179 Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---G 244090 | |||||| || ||| || |||| | | | || ||| || || ||| | Sbjct 56180 TTTTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGA---GGAGCCAAGGG 56236 Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150 || || || || || ||||| | |||||| || || ||| | |||| | || ||| Sbjct 56237 TTGACGACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGC 56296 Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210 |||| || || || |||||| ||||| ||||| ||||| |||||||| | ||| Sbjct 56297 TCGAAGCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACG 56356 Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA-GCTCGTTCCAGTCCCA 244269 || ||| ||| | || |||||| |||| | |||| ||| | |||||| Sbjct 56357 AGGAGAGAGTTGCGGACACCGTGC-------TGCGCAATCTGCTGCTTTAAGCTGTCCCA 56409 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 || || ||||||| | ||| |||||||||||| | || ||| ||||| Sbjct 56410 -ATCCC--AGAGGTCAGTAGGCGTGACACCCCACATGTCATATTGGAGCTCTCCCTTCGA 56466 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCT 244388 || || ||||||||| ||| ||| || || | || ||| |||| | | | | Sbjct 56467 TACTGGCGAGCCCTCGTATGTCTCGTAAGGTCCATGCACCTTGGCAAGCTCAACCGATGC 56526 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431 || ||| ||||||| ||||||||||| ||||| |||||| Sbjct 56527 AGT-GAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTT 56568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327230500640