Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq153 295 1e-74
seq15 192 1e-43
seq75 181 2e-40
seq155 116 7e-21
>seq153
Length=80566
Score = 295 bits (326), Expect = 1e-74
Identities = 1112/1724 (65%), Gaps = 79/1724 (5%)
Strand=Plus/Plus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| ||||||||| |||||| ||| ||| |||| | ||||| ||||||||||||||
Sbjct 59392 ACGGTGAACTGGATCGGTGCGGTGGCTGCCATGGTGCGGAGGTAATACATGCCGGTCTTC 59451
Query 243797 AGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854
|| || ||| |||| | || ||||||| || | ||| |||| | ||
Sbjct 59452 AGACCCAACTT--CCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGT------TG 59503
Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914
|||| | | | || ||| | |||||| || || | ||||| | || |
Sbjct 59504 GGTCCTTCATGTG------GATGTTCATCGACTGGGATTGATCAATGAAGGCACCACGAT 59557
Query 243915 CTGCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973
| || ||||| || || |||| | ||||| ||||| | |||||||||| | | |
Sbjct 59558 CAGCAGCCATCTGGACGATCGTCCGT-TGAGAGATCTCCCAGACCGTCTTGTACAGAGCC 59616
Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033
|||| || | |||| ||||||||| | ||||| | |||||| ||
Sbjct 59617 TTGATGTCGGCTGGGATATTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGG 59676
Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---G 244090
| |||||| || ||| || |||| | | | || ||| || || ||| |
Sbjct 59677 TTTTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGA---GGAGCCAAGGG 59733
Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150
|| || || || || ||||| | |||||| || || ||| | |||| | || |||
Sbjct 59734 TTGACGACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGC 59793
Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210
|||| || || || |||||| ||||| ||||| ||||| |||||||| | |||
Sbjct 59794 TCGAAGCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACG 59853
Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA-GCTCGTTCCAGTCCCA 244269
|| ||| ||| | || |||||| |||| | |||| ||| | ||||||
Sbjct 59854 AGGAGAGAGTTGCGGACACCGTGC-------TGCGCAATCTGCTGCTTTAAGCTGTCCCA 59906
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
|| || ||||||| | ||| ||||||||||| | || ||| |||||
Sbjct 59907 -ATCCC--AGAGGTCAGTAGGCGTGACACCCCACATGTCGTATTGGAGCTCTCCCTTCGA 59963
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCT 244388
|| || ||||||||| ||| ||| || || | || ||| |||| | | | |
Sbjct 59964 TACTGGCGAGCCCTCGTATGTCTCGTAAGGTCCATGCACCTTGGCAAGCTCAACCGATGC 60023
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448
|| ||| ||||||| ||||||||||| ||||| |||||| | || ||||| |
Sbjct 60024 AGT-GAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCTCGG 60082
Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
| ||| || | || | | ||| | || || || || || || || |
Sbjct 60083 GCGATTCGAAAGGTAAGCGGAGAGCAAGGAACGCATCAGCAAGACCTTGAACACCCACAG 60142
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
||||||| | ||||| |||| | || || || || ||||| | ||| |
Sbjct 60143 CGATGGGGCGATGTCGGAGGTTGCTCTTTCTAGCCTCTGGAACAGGGTAGTAATTGATAT 60202
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|||| | |||||| ||||| | | | || || ||| ||| ||| ||||
Sbjct 60203 CGATGATCTTGTTCAGGTTCTTGACAACGACTTGGCACACCTCGTGAAGCTTCTGGAAGT 60262
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCT 244686
|||| || | || || | || || || |||| |||||||
Sbjct 60263 CGTAG--GT----------GCCGTTGTTCATGTCAACGAAG--GTTGGCAGGGCGAGAGA 60308
Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
|||| ||||||||| || ||||| || | | | ||||| ||||| || ||||| ||
Sbjct 60309 AGCCAAGTTGCAGACAGCTACCTCATCTGGGGCAGAGTACTCCACAATTTCTGTGCACAG 60368
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
||| || ||| || ||||||| || || ||| ||| |||||| || |||||
Sbjct 60369 GTTGGAGCTTCGGATTGTTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTT 60428
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||||||||||||||| |||||||||| ||||| |||||| | || |||||| |
Sbjct 60429 GTAGAGCATGAAGGGGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGAGTTT 60488
Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926
| |||||||| ||| ||||| |||| || ||| |||||| ||| || |||||
Sbjct 60489 CTGAGCCTTGATAGTCTTGCGACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTC 60548
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTC 244984
|||||| || | || || | ||||||||||| || | |||||||| ||| ||
Sbjct 60549 GAACTCATCCCCGTAAACGTCTGCCAGGCCGGGGCATTCGTTG--GGGCACATCAGAGTC 60606
Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044
|| || ||| | || || | || ||||||||| ||||| ||||| ||||| | ||||
Sbjct 60607 CAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAG 60666
Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104
|| || | | | || || ||| |||||| | || || | || ||||||
Sbjct 60667 AGATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAG 60726
Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164
|| || | ||||| ||||| | ||||| || | || || || |||||||| || |||
Sbjct 60727 ACATCCGCATGCCATGGCTCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCC 60786
Query 245165 TGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224
|| || || || || |||||||| || || | ||||| ||||| || |||
Sbjct 60787 TGATCGACGTATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAG 60846
Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCC-----CTGAGGTTGCTGATGGAC 245278
| || || || || ||||||||| || | |||| ||| || || ||| |||
Sbjct 60847 TTTCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGA--GAC 60904
Query 245279 --ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336
|||||| || || | ||| ||||| | || ||| |||| | ||||| |
Sbjct 60905 CGATGCCT------CCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGA 60958
Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TG 245395
| || || || |||||| |||||||| || ||| ||||| || || || |||| || ||
Sbjct 60959 TACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTG 61018
Query 245396 GGG--CTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
||| | | ||| ||| |||||||| ||||| || |||
Sbjct 61019 GGGTACCGGCCGA---GAAGAGAGTGGGAGATGCGTGAGTGAAG 61059
>seq15
Length=607589
Score = 192 bits (212), Expect = 1e-43
Identities = 368/521 (71%), Gaps = 21/521 (4%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691
|| ||||| ||||||||||| |||||||| ||| ||||| || | | || | | ||
Sbjct 331203 CCTTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAG-GACAAGAACTCTAC 331145
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|||| | | | || || || ||| | || ||||| || ||||| ||| || ||||
Sbjct 331144 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 331085
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|| || || |||||| | ||| || |||| | ||||||||||||||||||||| ||||
Sbjct 331084 TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCT-GATGCCCGGACTCACCTTCTCAAACG 331026
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| | ||| | || ||||| || || | |||||||| ||||| || |||||| |
Sbjct 331025 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---C 330969
Query 42871 ACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929
|| | | |||| |||| | ||| || |||| || | ||||| |||||||| ||
Sbjct 330968 ACTTGAAGCAC-CGCCCAAGCAAGCAGGCCGTCCAAGCTGTTATCACCGAGGCCGTCGAA 330910
Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGA 42988
|||||| | || ||| | || || | || || ||| | || |||| ||||| | | |
Sbjct 330909 ATCGAGCAAGAATTCTTAACCGAGGCCCTTCCTTGTG-CTCTTCTCGGTATGAA-CGCAA 330852
Query 42989 C-CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCTCCT--GTGCCAGATGGGTC 43044
| |||||| |||| |||||| | | || ||||| | ||| || |||| | ||
Sbjct 330851 CTCTCATGAAGCAA-TACATCGAATTTGTTGCCGATCGTCTGCTCCTTGCC--CTCGGAA 330795
Query 43045 TC-AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAG 43103
| || | ||||||| | | ||| |||||||| |||||||||||||| | |
Sbjct 330794 ACGAGAAG-GTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCT 330736
Query 43104 GGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
|||||||||||||| ||||||||||| |||| ||||||||
Sbjct 330735 GGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 330695
>seq75
Length=245354
Score = 181 bits (200), Expect = 2e-40
Identities = 361/518 (70%), Gaps = 15/518 (3%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691
|||||||| ||||||||||| |||||||| ||| ||||| || | | || | | ||
Sbjct 39015 CCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAG-GACAAGAACTCTAC 39073
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|||| | | | || || || ||| | || ||||| || ||||| ||| || ||||
Sbjct 39074 CTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTT 39133
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|| || || |||||| | ||| || |||| | ||||||||||||||||||||| ||||
Sbjct 39134 TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCT-GATGCCCGGACTCACCTTCTCAAACG 39192
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| | ||| | || ||||| || || | |||||||| ||||| || |||||| |
Sbjct 39193 AGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---C 39249
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930
|| | | |||| || ||| || |||| | | ||||| |||||||| | |
Sbjct 39250 ACTTGAAGCACCGTCCAAGCAAGCAGGCCGTCCAAGATGTTATCACCGAGGCCGTCCAAA 39309
Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989
||||| | || ||| | || || | || || ||| | || |||| ||||| | | ||
Sbjct 39310 TCGAGCAAGAATTCTTAACCGAGGCCCTTCCTTGTG-CTCTTCTCGGTATGAA-CGCAAC 39367
Query 42990 -CTCATG-TGCAAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTC 43046
|| ||| |||| |||||| ||| || ||||| | ||| | | | | || |
Sbjct 39368 TCTAATGAAGCAA-TACATCGAGTTTGTTGCCGATCGTCTGCTTCTCGCCCTCGGAAATG 39426
Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106
|| | ||||||| | | ||| |||||||| |||||||||||||| | | |||
Sbjct 39427 AGAAG-GTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGC 39485
Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||||| ||||||||||| |||| ||||||||
Sbjct 39486 AAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 39523
>seq155
Length=79386
Score = 116 bits (128), Expect = 7e-21
Identities = 455/703 (65%), Gaps = 37/703 (5%)
Strand=Plus/Plus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| ||||||||| |||||| ||| ||| |||| | ||||| ||||||||||||||
Sbjct 55895 ACGGTGAACTGGATCGGTGCGGTGGCTGCCATGGTGCGGAGGTAATACATGCCGGTCTTC 55954
Query 243797 AGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854
|| || ||| |||| | || ||||||| || | ||| |||| | ||
Sbjct 55955 AGACCCAACTT--CCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGT------TG 56006
Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914
|||| |||| | || ||| | |||||| || || | ||||| | || |
Sbjct 56007 GGTC--CCTC----ATGTGGATGTTCATCGACTGGGATTGATCAATGAAGGCACCACGAT 56060
Query 243915 CTGCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973
| || ||||| || || |||| | ||||| ||||| | |||||||||| | | |
Sbjct 56061 CAGCAGCCATCTGGACGATCGTCCGT-TGAGAGATCTCCCAGACCGTCTTGTACAGAGCC 56119
Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033
|||| || | |||| ||||||||| | ||||| | |||||| ||
Sbjct 56120 TTGATGTCGGCTGGGATATTGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGG 56179
Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---G 244090
| |||||| || ||| || |||| | | | || ||| || || ||| |
Sbjct 56180 TTTTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGA---GGAGCCAAGGG 56236
Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150
|| || || || || ||||| | |||||| || || ||| | |||| | || |||
Sbjct 56237 TTGACGACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGC 56296
Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210
|||| || || || |||||| ||||| ||||| ||||| |||||||| | |||
Sbjct 56297 TCGAAGCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACG 56356
Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGA-GCTCGTTCCAGTCCCA 244269
|| ||| ||| | || |||||| |||| | |||| ||| | ||||||
Sbjct 56357 AGGAGAGAGTTGCGGACACCGTGC-------TGCGCAATCTGCTGCTTTAAGCTGTCCCA 56409
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
|| || ||||||| | ||| |||||||||||| | || ||| |||||
Sbjct 56410 -ATCCC--AGAGGTCAGTAGGCGTGACACCCCACATGTCATATTGGAGCTCTCCCTTCGA 56466
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCT 244388
|| || ||||||||| ||| ||| || || | || ||| |||| | | | |
Sbjct 56467 TACTGGCGAGCCCTCGTATGTCTCGTAAGGTCCATGCACCTTGGCAAGCTCAACCGATGC 56526
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431
|| ||| ||||||| ||||||||||| ||||| ||||||
Sbjct 56527 AGT-GAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTT 56568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944327230500640
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