Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq102 116 9e-21 seq38 116 9e-21 seq75 114 3e-20 seq15 114 3e-20 seq7 114 3e-20 seq96 113 1e-19 seq59 109 1e-18 seq10 109 1e-18 >seq102 Length=175646 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| |||| || || || ||||| || || |||| Sbjct 56138 CCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAA 56197 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | ||| || || ||||||||||| || || || |||| Sbjct 56198 AGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGG 56257 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || | ||| || || || || | || || || || Sbjct 56258 ATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACC 56317 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 56318 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364 >seq38 Length=423541 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| |||| || || || ||||| || || |||| Sbjct 319950 CCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAA 320009 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | ||| || || ||||||||||| || || || |||| Sbjct 320010 AGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGG 320069 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || | ||| || || || || | || || || || Sbjct 320070 ATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACC 320129 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 320130 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176 >seq75 Length=245354 Score = 114 bits (126), Expect = 3e-20 Identities = 139/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 269140 CCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCT 269199 || ||| || | |||||||||| || ||| ||||| ||||| ||||| || || || Sbjct 39339 CCTTGTGCTCTTCTCGGTATGAACGCAACTCTAATGAAGCAATACATCGAGTTTGTTGCC 39398 Query 269200 GATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGC 269258 |||||| | |||| || | ||||| ||||||| || ||||| || | || || |||| Sbjct 39399 GATCGTCTGCTTCTCGCC-CTCGGAAATGAGAAGGTCTACAAGTCTACCAACCCATTCGA 39457 Query 269259 CTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGA 269318 ||| ||||| || || || | || ||||| ||||||||||| ||||||||| | || Sbjct 39458 CTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGA 39517 Query 269319 CTATCAA 269325 ||| ||| Sbjct 39518 CTACCAA 39524 >seq15 Length=607589 Score = 114 bits (126), Expect = 3e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 269140 CCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCT 269199 || ||| || | |||||||||| || ||||||||| ||||| |||||||| || || Sbjct 330879 CCTTGTGCTCTTCTCGGTATGAACGCAACTCTCATGAAGCAATACATCGAATTTGTTGCC 330820 Query 269200 GATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCC 269259 |||||| | || || ||||| | ||||| || ||||| || | || || |||| | Sbjct 330819 GATCGTCTGCTCCTTGCCCTCGGAAACGAGAAGGTCTACAAGTCTACCAACCCATTCGAC 330760 Query 269260 TTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGAC 269319 || ||||| || || || | || ||||| ||||||||||| ||||||||| | ||| Sbjct 330759 TTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 330700 Query 269320 TATCAA 269325 || ||| Sbjct 330699 TACCAA 330694 >seq7 Length=756160 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || || || || || | ||| || || ||||| Sbjct 415621 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAA 415562 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || ||||| |||||| || ||| || ||||| ||||| || || || | ||| || Sbjct 415561 AATGAGACGTTGTTGA---TCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGAC 415505 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | ||| ||||| ||||| | || || ||||| ||||| |||||||| Sbjct 415504 GTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTT 415445 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 415444 GACGAAGATTTGCAT 415430 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || |||||||| || || ||| | ||||| || || |||| ||| || || Sbjct 415854 GTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCCTCTAGTTGCTTACCA 415795 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 |||||||||| || || || |||||| ||||| ||||||||||| || | ||| Sbjct 415794 GCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTC 415735 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || || | || || || ||||| | ||||| ||||| || |||| ||| Sbjct 415734 ACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTCCAGTCAAGGTC 415675 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 415674 TTGACGAAGATCTGCAT 415658 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || || || || || || | ||| || || |||||| Sbjct 415392 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAG 415333 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||| |||||| | ||||| || || || || ||||| |||| || || || Sbjct 415332 ATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACATTG 415273 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| || ||||| ||||| ||||| ||||| || |||||||| Sbjct 415272 TCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 415214 >seq96 Length=182788 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||||| || |||||||| || || ||| | ||||| || || || || || || || Sbjct 166861 GTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCCTCCAACTGCTTACCA 166802 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || ||||||| ||||| || |||||| ||||| ||||||||||| || | ||| Sbjct 166801 GCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTC 166742 Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || || | || || || ||||| | ||||| ||||| || |||| |||| Sbjct 166741 ACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTCCAGTCAAAGTC 166682 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 166681 TTGACGAAGATCTGCAT 166665 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || || || || || | || || || || || Sbjct 166628 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTGCTTGCCAGCAAA 166569 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || ||||| |||||| || ||| || ||||| ||||| || || || | ||| || Sbjct 166568 AATGAGACGTTGTTGA---TCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGAC 166512 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | ||| || || ||||| | ||||| ||||| ||||| |||||||| Sbjct 166511 GTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTT 166452 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 166451 GACGAAGATTTGCAT 166437 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| || || || ||||| || ||||||| Sbjct 166435 CCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 166376 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | ||| || || |||||||||||||| |||||| | || Sbjct 166375 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGA 166316 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| |||| || || || || || | || ||||| || Sbjct 166315 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGACC 166256 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||||| ||||| ||||| ||||| || |||||||| Sbjct 166255 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 166221 >seq59 Length=321881 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||| | || ||||| ||||| || | ||| ||||| ||||||||| Sbjct 265770 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 265829 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||| || || ||| ||||| || || |||||||| || | ||| || || Sbjct 265830 AGACGCTGCTG---GTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTG 265886 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || || ||||| ||||| || || || ||||||||| Sbjct 265887 TCGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 265946 Query 288463 AA 288464 || Sbjct 265947 AA 265948 >seq10 Length=717553 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||| | || ||||| ||||| || | ||| ||||| ||||||||| Sbjct 20114 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 20055 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||||||| || || ||| ||||| || || |||||||| || | ||| || || Sbjct 20054 AGACGCTGCTGG---TCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTG 19998 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || || || ||||| ||||| || || || ||||||||| Sbjct 19997 TCGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 19938 Query 288463 AA 288464 || Sbjct 19937 AA 19936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179639074077492