Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq102 116 9e-21
seq38 116 9e-21
seq75 114 3e-20
seq15 114 3e-20
seq7 114 3e-20
seq96 113 1e-19
seq59 109 1e-18
seq10 109 1e-18
>seq102
Length=175646
Score = 116 bits (128), Expect = 9e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | || ||||| |||| || || || ||||| || || ||||
Sbjct 56138 CCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAA 56197
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | ||| || || ||||||||||| || || || ||||
Sbjct 56198 AGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGG 56257
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || | ||| || || || || | || || || ||
Sbjct 56258 ATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACC 56317
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || || || ||||||||||| ||||||||
Sbjct 56318 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364
>seq38
Length=423541
Score = 116 bits (128), Expect = 9e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | || ||||| |||| || || || ||||| || || ||||
Sbjct 319950 CCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAA 320009
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | ||| || || ||||||||||| || || || ||||
Sbjct 320010 AGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGG 320069
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || | ||| || || || || | || || || ||
Sbjct 320070 ATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACC 320129
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || || || ||||||||||| ||||||||
Sbjct 320130 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176
>seq75
Length=245354
Score = 114 bits (126), Expect = 3e-20
Identities = 139/187 (74%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 269140 CCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCT 269199
|| ||| || | |||||||||| || ||| ||||| ||||| ||||| || || ||
Sbjct 39339 CCTTGTGCTCTTCTCGGTATGAACGCAACTCTAATGAAGCAATACATCGAGTTTGTTGCC 39398
Query 269200 GATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGC 269258
|||||| | |||| || | ||||| ||||||| || ||||| || | || || ||||
Sbjct 39399 GATCGTCTGCTTCTCGCC-CTCGGAAATGAGAAGGTCTACAAGTCTACCAACCCATTCGA 39457
Query 269259 CTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGA 269318
||| ||||| || || || | || ||||| ||||||||||| ||||||||| | ||
Sbjct 39458 CTTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGA 39517
Query 269319 CTATCAA 269325
||| |||
Sbjct 39518 CTACCAA 39524
>seq15
Length=607589
Score = 114 bits (126), Expect = 3e-20
Identities = 137/186 (74%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 269140 CCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCT 269199
|| ||| || | |||||||||| || ||||||||| ||||| |||||||| || ||
Sbjct 330879 CCTTGTGCTCTTCTCGGTATGAACGCAACTCTCATGAAGCAATACATCGAATTTGTTGCC 330820
Query 269200 GATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCC 269259
|||||| | || || ||||| | ||||| || ||||| || | || || |||| |
Sbjct 330819 GATCGTCTGCTCCTTGCCCTCGGAAACGAGAAGGTCTACAAGTCTACCAACCCATTCGAC 330760
Query 269260 TTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGAC 269319
|| ||||| || || || | || ||||| ||||||||||| ||||||||| | |||
Sbjct 330759 TTCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGAC 330700
Query 269320 TATCAA 269325
|| |||
Sbjct 330699 TACCAA 330694
>seq7
Length=756160
Score = 114 bits (126), Expect = 3e-20
Identities = 143/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| | || || || || || | ||| || || |||||
Sbjct 415621 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAA 415562
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|| ||||| |||||| || ||| || ||||| ||||| || || || | ||| ||
Sbjct 415561 AATGAGACGTTGTTGA---TCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGAC 415505
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | ||| ||||| ||||| | || || ||||| ||||| ||||||||
Sbjct 415504 GTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTT 415445
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 415444 GACGAAGATTTGCAT 415430
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
||||| || |||||||| || || ||| | ||||| || || |||| ||| || ||
Sbjct 415854 GTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCCTCTAGTTGCTTACCA 415795
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396
|||||||||| || || || |||||| ||||| ||||||||||| || | |||
Sbjct 415794 GCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTC 415735
Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || || | || || || ||||| | ||||| ||||| || |||| |||
Sbjct 415734 ACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTCCAGTCAAGGTC 415675
Query 288457 TTGACGAATATCTGCAT 288473
|||||||| ||||||||
Sbjct 415674 TTGACGAAGATCTGCAT 415658
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || || || || || || | ||| || || ||||||
Sbjct 415392 TCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAG 415333
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||||||| |||||| | ||||| || || || || ||||| |||| || || ||
Sbjct 415332 ATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACATTG 415273
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | ||| ||||| || ||||| ||||| ||||| ||||| || ||||||||
Sbjct 415272 TCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 415214
>seq96
Length=182788
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
||||| || |||||||| || || ||| | ||||| || || || || || || ||
Sbjct 166861 GTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCCTCCAACTGCTTACCA 166802
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396
|| ||||||| ||||| || |||||| ||||| ||||||||||| || | |||
Sbjct 166801 GCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTC 166742
Query 288397 ACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || || | || || || ||||| | ||||| ||||| || |||| ||||
Sbjct 166741 ACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTCCAGTCAAAGTC 166682
Query 288457 TTGACGAATATCTGCAT 288473
|||||||| ||||||||
Sbjct 166681 TTGACGAAGATCTGCAT 166665
Score = 105 bits (116), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| | || || || || || | || || || || ||
Sbjct 166628 TTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTGCTTGCCAGCAAA 166569
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
|| ||||| |||||| || ||| || ||||| ||||| || || || | ||| ||
Sbjct 166568 AATGAGACGTTGTTGA---TCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGAC 166512
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||| || || | ||| || || ||||| | ||||| ||||| ||||| ||||||||
Sbjct 166511 GTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTT 166452
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 166451 GACGAAGATTTGCAT 166437
Score = 104 bits (114), Expect = 6e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | |||| || || || ||||| || |||||||
Sbjct 166435 CCACCACGGAGACGGAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 166376
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | ||| || || |||||||||||||| |||||| | ||
Sbjct 166375 AGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGTTGATCAGGGGGA 166316
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || || ||||| |||| || || || || || | || ||||| ||
Sbjct 166315 ATACCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCGATGGTGTCAGAGGATTCGACC 166256
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||||| ||||| ||||| ||||| || ||||||||
Sbjct 166255 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 166221
>seq59
Length=321881
Score = 109 bits (120), Expect = 1e-18
Identities = 134/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||| | || ||||| ||||| || | ||| ||||| |||||||||
Sbjct 265770 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 265829
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||||||| || || ||| ||||| || || |||||||| || | ||| || ||
Sbjct 265830 AGACGCTGCTG---GTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTG 265886
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| || || || || || ||||| ||||| || || || |||||||||
Sbjct 265887 TCGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 265946
Query 288463 AA 288464
||
Sbjct 265947 AA 265948
>seq10
Length=717553
Score = 109 bits (120), Expect = 1e-18
Identities = 134/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||| | || ||||| ||||| || | ||| ||||| |||||||||
Sbjct 20114 TTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGATC 20055
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||||||| || || ||| ||||| || || |||||||| || | ||| || ||
Sbjct 20054 AGACGCTGCTGG---TCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTG 19998
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| || || || || || ||||| ||||| || || || |||||||||
Sbjct 19997 TCGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 19938
Query 288463 AA 288464
||
Sbjct 19937 AA 19936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179639074077492
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