Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq96 113 5e-20 seq102 104 2e-17 seq38 104 2e-17 seq7 104 2e-17 >seq96 Length=182788 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| |||||||| || | | ||| || | || || ||||||||||| Sbjct 166633 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTGCTTGCCA 166574 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| ||||||| || || || || || ||||| ||||| || ||||| || ||| || Sbjct 166573 GCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTG 166514 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| || |||||||| | || | ||||||||||| | ||| Sbjct 166513 ACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGTC 166454 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 166453 TTGACGAAGATTTGCAT 166437 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | || || || || || |||||||| || | Sbjct 166152 ACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 166093 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| ||||| |||||||| || | || || || |||||||| || || Sbjct 166092 GAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCCGGGGG 166033 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||| ||| || | || ||| || || || Sbjct 166032 AATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGATTCAAC 165973 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | ||| | |||||||||||| Sbjct 165972 CTCAAGAGTGATGGTCTTGCCGGT 165949 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || ||||| ||||||||||| | |||||| | || || | |||||| || ||| | Sbjct 166855 TCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCATCCTCCAACTGCTTACCAGCAAAG 166796 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | ||||||||||| || || || ||||| || || || || || ||| ||| Sbjct 166795 ATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTCACATTG 166736 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||| || | || ||||||| || | ||||| || |||||||| || ||| Sbjct 166735 TCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACG 166676 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 166675 AAGATCTGCAT 166665 >seq102 Length=175646 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| ||||| || || || ||||||||||| | | |||||| ||||| Sbjct 56153 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCT 56212 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||||||||| | || || || ||||||||||| || || ||||| || ||| Sbjct 56213 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCT 56272 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || || ||| || | || ||| | ||||| || | || | ||| Sbjct 56273 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 56332 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 56333 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364 >seq38 Length=423541 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| ||||| || || || ||||||||||| | | |||||| ||||| Sbjct 319965 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCT 320024 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||||||||| | || || || ||||||||||| || || ||||| || ||| Sbjct 320025 TCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCT 320084 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || || ||| || | || ||| | ||||| || | || | ||| Sbjct 320085 TGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 320144 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 320145 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176 >seq7 Length=756160 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| |||||||| || | | ||| || | || || || |||||||| Sbjct 415626 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTGCTTGCCA 415567 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || ||||||| || || || || || ||||| ||||| || ||||| || ||| || Sbjct 415566 GCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTG 415507 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| || |||||||| | || | ||||||||||| | ||| Sbjct 415506 ACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTC 415447 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 415446 TTGACGAAGATTTGCAT 415430 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | || || || || || |||||||| || | Sbjct 415145 ACCGCCACGAAGACGGAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 415086 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| |||| ||||| |||||||| || | || || || |||||||||||||| Sbjct 415085 GAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGG 415026 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||| ||| || | || || || || || Sbjct 415025 AATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAAC 414966 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | ||| | |||||||||||| Sbjct 414965 CTCAAGAGTGATGGTCTTGCCGGT 414942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638467002160