Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq153 215 5e-51
seq155 149 6e-31
>seq153
Length=80566
Score = 215 bits (238), Expect = 5e-51
Identities = 1069/1678 (64%), Gaps = 52/1678 (3%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| ||||| || |||||| ||| ||||| || | ||||||
Sbjct 61226 AACTACCAATACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGC 61167
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| | ||||| || || || || | ||||| || || | || |||||||| |
Sbjct 61166 AAGGTTGCTGAGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGAT 61107
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891
|| || ||| |||| || || ||||||| | || || || | ||
Sbjct 61106 GATAT--CGAG------GCGG-CTATC-GAGACATACA--ACTTGATGTCCAGCAAATTC 61059
Query 93892 ---------GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCG 93942
|| | || || || ||| || || ||||| | | || | || ||
Sbjct 61058 TTCACTCACGCATCTCCCACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCA 60999
Query 93943 TGTTTCCTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGA 94001
|| |||||||| ||| | |||| ||| || ||| || | ||||| || |||
Sbjct 60998 TGCTTCCTGATCGAC-ATGAAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGAC 60940
Query 94002 CTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGC 94061
|||||| | |||||||| | || || || ||||| ||| ||||| | || ||
Sbjct 60939 CTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGC 60880
Query 94062 CAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCG 94121
| || |||||||| |||||| ||||| | |||||| ||| | || || ||||||||
Sbjct 60879 TACCGGGGCCTACATCGCCGGTACAAATGGAAACTCCAATGGCATTGTGCCCATGCTCCG 60820
Query 94122 GGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTT 94181
|||||||||||| | || | ||||| || |||||||| | | | ||| | ||
Sbjct 60819 AGTCTTCAACAACACCGCAAGATACGTCGATCAGGGTGGAAACAAGCGTCCGGGAGCGTT 60760
Query 94182 CGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAA 94241
|| |||| |||||||| ||||| ||||| || | ||| | ||||| ||||||||
Sbjct 60759 TGCCATCTACCTCGAGCCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAA 60700
Query 94242 CCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCT 94301
||| || || || | | || | || ||||||||||| || ||| | || || ||
Sbjct 60699 CCATGGAAAAGAGGAAGTTCGTGCACGCGATCTCTTCTACGCCCTGTGGATTCCCGATCT 60640
Query 94302 TTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCC 94361
|| ||||| || || ||||| ||| | ||||| ||| | || ||||| ||||| ||
Sbjct 60639 CTTCATGAAGCGTGTTGAGAAGAACGGAGACTGGACTCTGATGTGCCCCAACGAATGCCC 60580
Query 94362 CGGACTGTCCGACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCG 94419
||| ||| | ||||||| | |||| | | || || | | || | |||||
Sbjct 60579 CGGCCTGGCAGACGTTTACGGGGAT-GAG-TTCGAGGCTCTCTACGAGAAATACGAGAGA 60522
Query 94420 CAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTA 94479
| || |||| | ||| ||| | ||| ||| || ||| | ||| | || |
Sbjct 60521 GAAGGTAAGGGTCGCAAGACTATCAAGGCTCAGAAACTCTGGTACTCCATCCTCGAGGCC 60462
Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAAC 94539
|| ||||| || | |||| ||| | | |||||| || |||| ||| ||||
Sbjct 60461 CAAACCGAGACCGGGAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGCAAC 60402
Query 94540 CAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACT 94599
||| || |||| || ||| ||||| || |||||||| || ||||| ||||| ||
Sbjct 60401 CAGAAGAACCTGGGAACAATCCGAAGCTCCAACCTGTGCACAGAAATTGTGGAGTACTCT 60342
Query 94600 TCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA 94659
| || || ||| | ||||| || ||| ||| || || |||| | || ||||| ||
Sbjct 60341 GCCCCAGATGAGGTAGCTGTCTGCAACTTGGCTTCTCTCGCCCTGCCAACCTTCGT-TGA 60283
Query 94660 GATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG- 94718
||| ||| || || | | ||| | || ||||| | | | | |||
Sbjct 60282 CATG--AACA-----ACGGC-ACCTACGACTTCCAGAAGCTTCACGAGGT-GTGCCAAGT 60232
Query 94719 GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGA 94778
| ||| ||||||||||| | | ||||| | || | |||||| || || |||||
Sbjct 60231 CGTTGTCAAGAACCTGAACAAGATCATCGATATCAATTACTACCCTGTTCCAGAGGCTAG 60172
Query 94779 GAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCT 94838
|| ||||| ||||| ||||||| | || || || ||| | || || ||| |
Sbjct 60171 AAAGAGCAACCTCCGACATCGCCCCATCGCTGTGGGTGTTCAAGGTCTTGCTGATGCGTT 60112
Query 94839 GGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATT 94898
| | || | || | ||| || ||| || | | || | | || ||
Sbjct 60111 CCTTGCTCTCCGCTTACCTTTCGAATCGCCCGAGGCCAAGTACCTCAACAAGCAAATCTT 60052
Query 94899 CGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCG 94957
|| | ||| ||| ||| || | | ||| || | |||| | || | | | |
Sbjct 60051 TGAGACCATCTATCACGCCGCTCTCACTGCATCGGTTGAGCTTGCCAAGGT-GCA---TG 59996
Query 94958 GGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017
| || |||| | | | || ||||| | |||| | || | |||| | |
Sbjct 59995 GACCTTACGAGACATACGAGGGCTCGCCAGTATCGAAGGGAGAGCTCCAATACGACATGT 59936
Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGC-GCTGATGTTATCAA 95075
||||||| | ||| | | || | || ||||| |||| | || || || || |
Sbjct 59935 GGGGTGTCACGCCTACTGACCTCTGGGATTGGGACAGCTTAAAGCAGCAGA--TTGCGCA 59878
Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135
|||||||| ||| | || || ||||| |||||||| || ||| ||| |||||
Sbjct 59877 GCACGGTGTCCGCAACTCTCTCCTCGTGGCTCCCATGCCAACTGCCAGCACCAGTCAGAT 59818
Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195
|| ||| |||||| | ||||| || | |||||||||| | ||| | || |||||
Sbjct 59817 TCTGGGCTTCAACGAATGCTTCGAGCCATACACCTCCAACATTTACTCTCGTCGTGTGCT 59758
Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255
|| || ||||||| ||| ||||| ||||| ||| || | ||||| |
Sbjct 59757 GGCTGGAGAATTCCAAGTCGTCAACCCTTGGCTCCTCAAGGATCTCGTGGACATGGGTCT 59698
Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTGCTACGC-GCCAACGGCTCCGTCCAGAACATCC 95314
||| |||||| | || |||| | | ||| | |||||| ||||||||||||
Sbjct 59697 CTGGTCTGACAACATGAAAAACC-GCATCATCGCTGAGGGTGGCTCCATCCAGAACATCC 59639
Query 95315 CGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
| | || || | ||||||||||| || |||||||| || ||||||||| | || ||
Sbjct 59638 CCAATATCCCAGCCGACATCAAGGCTCTGTACAAGACGGTCTGGGAGATCTCTCAACG 59581
>seq155
Length=79386
Score = 149 bits (164), Expect = 6e-31
Identities = 429/653 (66%), Gaps = 28/653 (4%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| ||||| || |||||| ||| ||||| || | ||||||
Sbjct 57322 AACTACCAATACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGC 57263
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| | ||||| || || || || | ||||| || || | || |||||||| |
Sbjct 57262 AAAGTTGCTGAGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGAT 57203
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGT-------ATAC 93887
|| || ||| |||| || || ||||| | | || || || ||||
Sbjct 57202 GATAT--CGAG------GCGG-CTATC-GAGACGTACA--ACTTGATGTCCAGCAAATAC 57155
Query 93888 ------CATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTC 93941
|||| | | || || || ||| || || ||||| | | || | || ||
Sbjct 57154 TTCACTCATG-CATCTCCCACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATC 57096
Query 93942 GTGTTTCCTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGG 94000
|| |||||||| ||| | |||| ||| || ||| || | ||||| || |||
Sbjct 57095 ATGCTTCCTGATCGAC-ATGAAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGA 57037
Query 94001 ACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTG 94060
|||||| | |||||||| | || || || ||||| ||| ||||| | || |
Sbjct 57036 CCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGG 56977
Query 94061 CCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCC 94120
| | || |||||||| |||||| ||||| | |||||| ||| | || || |||||||
Sbjct 56976 CTACCGGGGCCTACATCGCCGGTACAAATGGGAACTCCAATGGCATTGTGCCCATGCTCC 56917
Query 94121 GGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTT 94180
| |||||||||||| | || | || || || |||||||| | | | ||| | |
Sbjct 56916 GAGTCTTCAACAACACCGCAAGATATGTCGATCAGGGTGGAAACAAGCGTCCGGGAGCGT 56857
Query 94181 TCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGA 94240
| || | || |||||||| ||||| ||||| || | ||| | ||||| |||||||
Sbjct 56856 TTGCCATTTACCTCGAGCCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGA 56797
Query 94241 ACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACC 94300
|||| || || || | | || | || || |||||||| || ||| | || || |
Sbjct 56796 ACCATGGAAAAGAGGAAGTTCGTGCACGCGATCTTTTCTACGCCCTGTGGATTCCCGATC 56737
Query 94301 TTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAAT 94353
| || ||||| || || ||||| ||| | ||||| ||| | || ||||||
Sbjct 56736 TCTTCATGAAGCGTGTTGAGAAGAACGGAGACTGGACTCTGATGTGCCCCAAT 56684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494716929383440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |