Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq153 215 5e-51 seq155 149 6e-31 >seq153 Length=80566 Score = 215 bits (238), Expect = 5e-51 Identities = 1069/1678 (64%), Gaps = 52/1678 (3%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| ||||| || |||||| ||| ||||| || | |||||| Sbjct 61226 AACTACCAATACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGC 61167 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | ||||| || || || || | ||||| || || | || |||||||| | Sbjct 61166 AAGGTTGCTGAGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGAT 61107 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891 || || ||| |||| || || ||||||| | || || || | || Sbjct 61106 GATAT--CGAG------GCGG-CTATC-GAGACATACA--ACTTGATGTCCAGCAAATTC 61059 Query 93892 ---------GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCG 93942 || | || || || ||| || || ||||| | | || | || || Sbjct 61058 TTCACTCACGCATCTCCCACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATCA 60999 Query 93943 TGTTTCCTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGA 94001 || |||||||| ||| | |||| ||| || ||| || | ||||| || ||| Sbjct 60998 TGCTTCCTGATCGAC-ATGAAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGAC 60940 Query 94002 CTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGC 94061 |||||| | |||||||| | || || || ||||| ||| ||||| | || || Sbjct 60939 CTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGC 60880 Query 94062 CAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCG 94121 | || |||||||| |||||| ||||| | |||||| ||| | || || |||||||| Sbjct 60879 TACCGGGGCCTACATCGCCGGTACAAATGGAAACTCCAATGGCATTGTGCCCATGCTCCG 60820 Query 94122 GGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTT 94181 |||||||||||| | || | ||||| || |||||||| | | | ||| | || Sbjct 60819 AGTCTTCAACAACACCGCAAGATACGTCGATCAGGGTGGAAACAAGCGTCCGGGAGCGTT 60760 Query 94182 CGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAA 94241 || |||| |||||||| ||||| ||||| || | ||| | ||||| |||||||| Sbjct 60759 TGCCATCTACCTCGAGCCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAA 60700 Query 94242 CCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCT 94301 ||| || || || | | || | || ||||||||||| || ||| | || || || Sbjct 60699 CCATGGAAAAGAGGAAGTTCGTGCACGCGATCTCTTCTACGCCCTGTGGATTCCCGATCT 60640 Query 94302 TTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCC 94361 || ||||| || || ||||| ||| | ||||| ||| | || ||||| ||||| || Sbjct 60639 CTTCATGAAGCGTGTTGAGAAGAACGGAGACTGGACTCTGATGTGCCCCAACGAATGCCC 60580 Query 94362 CGGACTGTCCGACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCG 94419 ||| ||| | ||||||| | |||| | | || || | | || | ||||| Sbjct 60579 CGGCCTGGCAGACGTTTACGGGGAT-GAG-TTCGAGGCTCTCTACGAGAAATACGAGAGA 60522 Query 94420 CAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTA 94479 | || |||| | ||| ||| | ||| ||| || ||| | ||| | || | Sbjct 60521 GAAGGTAAGGGTCGCAAGACTATCAAGGCTCAGAAACTCTGGTACTCCATCCTCGAGGCC 60462 Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAAC 94539 || ||||| || | |||| ||| | | |||||| || |||| ||| |||| Sbjct 60461 CAAACCGAGACCGGGAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGCAAC 60402 Query 94540 CAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACT 94599 ||| || |||| || ||| ||||| || |||||||| || ||||| ||||| || Sbjct 60401 CAGAAGAACCTGGGAACAATCCGAAGCTCCAACCTGTGCACAGAAATTGTGGAGTACTCT 60342 Query 94600 TCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA 94659 | || || ||| | ||||| || ||| ||| || || |||| | || ||||| || Sbjct 60341 GCCCCAGATGAGGTAGCTGTCTGCAACTTGGCTTCTCTCGCCCTGCCAACCTTCGT-TGA 60283 Query 94660 GATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG- 94718 ||| ||| || || | | ||| | || ||||| | | | | ||| Sbjct 60282 CATG--AACA-----ACGGC-ACCTACGACTTCCAGAAGCTTCACGAGGT-GTGCCAAGT 60232 Query 94719 GATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGA 94778 | ||| ||||||||||| | | ||||| | || | |||||| || || ||||| Sbjct 60231 CGTTGTCAAGAACCTGAACAAGATCATCGATATCAATTACTACCCTGTTCCAGAGGCTAG 60172 Query 94779 GAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCT 94838 || ||||| ||||| ||||||| | || || || ||| | || || ||| | Sbjct 60171 AAAGAGCAACCTCCGACATCGCCCCATCGCTGTGGGTGTTCAAGGTCTTGCTGATGCGTT 60112 Query 94839 GGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATT 94898 | | || | || | ||| || ||| || | | || | | || || Sbjct 60111 CCTTGCTCTCCGCTTACCTTTCGAATCGCCCGAGGCCAAGTACCTCAACAAGCAAATCTT 60052 Query 94899 CGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCA-CTTGGCCAGATCGGACGGCG 94957 || | ||| ||| ||| || | | ||| || | |||| | || | | | | Sbjct 60051 TGAGACCATCTATCACGCCGCTCTCACTGCATCGGTTGAGCTTGCCAAGGT-GCA---TG 59996 Query 94958 GGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017 | || |||| | | | || ||||| | |||| | || | |||| | | Sbjct 59995 GACCTTACGAGACATACGAGGGCTCGCCAGTATCGAAGGGAGAGCTCCAATACGACATGT 59936 Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGC-GCTGATGTTATCAA 95075 ||||||| | ||| | | || | || ||||| |||| | || || || || | Sbjct 59935 GGGGTGTCACGCCTACTGACCTCTGGGATTGGGACAGCTTAAAGCAGCAGA--TTGCGCA 59878 Query 95076 ACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135 |||||||| ||| | || || ||||| |||||||| || ||| ||| ||||| Sbjct 59877 GCACGGTGTCCGCAACTCTCTCCTCGTGGCTCCCATGCCAACTGCCAGCACCAGTCAGAT 59818 Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 || ||| |||||| | ||||| || | |||||||||| | ||| | || ||||| Sbjct 59817 TCTGGGCTTCAACGAATGCTTCGAGCCATACACCTCCAACATTTACTCTCGTCGTGTGCT 59758 Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255 || || ||||||| ||| ||||| ||||| ||| || | ||||| | Sbjct 59757 GGCTGGAGAATTCCAAGTCGTCAACCCTTGGCTCCTCAAGGATCTCGTGGACATGGGTCT 59698 Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTGCTACGC-GCCAACGGCTCCGTCCAGAACATCC 95314 ||| |||||| | || |||| | | ||| | |||||| |||||||||||| Sbjct 59697 CTGGTCTGACAACATGAAAAACC-GCATCATCGCTGAGGGTGGCTCCATCCAGAACATCC 59639 Query 95315 CGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | | || || | ||||||||||| || |||||||| || ||||||||| | || || Sbjct 59638 CCAATATCCCAGCCGACATCAAGGCTCTGTACAAGACGGTCTGGGAGATCTCTCAACG 59581 >seq155 Length=79386 Score = 149 bits (164), Expect = 6e-31 Identities = 429/653 (66%), Gaps = 28/653 (4%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| ||||| || |||||| ||| ||||| || | |||||| Sbjct 57322 AACTACCAATACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGC 57263 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||||| || || || || | ||||| || || | || |||||||| | Sbjct 57262 AAAGTTGCTGAGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGAT 57203 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGT-------ATAC 93887 || || ||| |||| || || ||||| | | || || || |||| Sbjct 57202 GATAT--CGAG------GCGG-CTATC-GAGACGTACA--ACTTGATGTCCAGCAAATAC 57155 Query 93888 ------CATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTC 93941 |||| | | || || || ||| || || ||||| | | || | || || Sbjct 57154 TTCACTCATG-CATCTCCCACTCTCTTCTCGGCCGGTACCCCACAGGCCCAACTTTCATC 57096 Query 93942 GTGTTTCCTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGG 94000 || |||||||| ||| | |||| ||| || ||| || | ||||| || ||| Sbjct 57095 ATGCTTCCTGATCGAC-ATGAAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGA 57037 Query 94001 ACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTG 94060 |||||| | |||||||| | || || || ||||| ||| ||||| | || | Sbjct 57036 CCTGTGCAATGATCTCAAAGAATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGG 56977 Query 94061 CCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCC 94120 | | || |||||||| |||||| ||||| | |||||| ||| | || || ||||||| Sbjct 56976 CTACCGGGGCCTACATCGCCGGTACAAATGGGAACTCCAATGGCATTGTGCCCATGCTCC 56917 Query 94121 GGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTT 94180 | |||||||||||| | || | || || || |||||||| | | | ||| | | Sbjct 56916 GAGTCTTCAACAACACCGCAAGATATGTCGATCAGGGTGGAAACAAGCGTCCGGGAGCGT 56857 Query 94181 TCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGA 94240 | || | || |||||||| ||||| ||||| || | ||| | ||||| ||||||| Sbjct 56856 TTGCCATTTACCTCGAGCCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGA 56797 Query 94241 ACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACC 94300 |||| || || || | | || | || || |||||||| || ||| | || || | Sbjct 56796 ACCATGGAAAAGAGGAAGTTCGTGCACGCGATCTTTTCTACGCCCTGTGGATTCCCGATC 56737 Query 94301 TTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAAT 94353 | || ||||| || || ||||| ||| | ||||| ||| | || |||||| Sbjct 56736 TCTTCATGAAGCGTGTTGAGAAGAACGGAGACTGGACTCTGATGTGCCCCAAT 56684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494716929383440