Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq155 120 5e-22
seq153 120 5e-22
>seq155
Length=79386
Score = 120 bits (132), Expect = 5e-22
Identities = 332/497 (67%), Gaps = 9/497 (2%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCAC-GGCAGGCCTGCTTCTCAGATAGTACAT 203895
||||| || || |||||||| || | || | ||| | | || | | || || |||||
Sbjct 55053 TCTTGATCGACGGTGAACTGGATCG-GTGCGGTGGCTGCCATGGTGCGGAGGTAATACAT 55111
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGT 203954
||||||||| || ||| || ||| || | ||||||| | | |||| || |||
Sbjct 55112 GCCGGTCTTCAGACCCAACTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGT 55171
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
|||| || |||||| ||||||| |||||| ||| || ||||| ||| || |||||
Sbjct 55172 TGGG-TCCCTCATGTGGATGTTCATCGACTGGGATTGATCAATGAA-GGCACCACGATCA 55229
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
|| ||||| | || || ||| || || |||||||| ||||||||| ||| | ||
Sbjct 55230 GCAGCCATCTGGACGATCGTCCGTTGAGAGATCTCCCAGACCGTCTTGTACAGAGCCTTG 55289
Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132
||| || | || | | || ||| || ||||| || || || | | |
Sbjct 55290 ATGTCGGCTGGGATAT-TGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGGTT 55348
Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192
|| | | || ||| | |||| | || ||| | || |||||||
Sbjct 55349 TTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGAGGAGCCAAGGGTTGAC 55408
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
|| || || ||||| | |||||| | || | | | | |||| |||| |||| |||||
Sbjct 55409 GACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGCTCGAA 55468
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||| ||| | ||||||| ||||||||| || ||||||||||||| ||| ||
Sbjct 55469 GCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACGAGGAG 55528
Query 204313 GGAGTTGCGCACACCGT 204329
|||||||| |||||||
Sbjct 55529 AGAGTTGCGGACACCGT 55545
Score = 120 bits (132), Expect = 5e-22
Identities = 332/497 (67%), Gaps = 9/497 (2%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCAC-GGCAGGCCTGCTTCTCAGATAGTACAT 203895
||||| || || |||||||| || | || | ||| | | || | | || || |||||
Sbjct 55886 TCTTGATCGACGGTGAACTGGATCG-GTGCGGTGGCTGCCATGGTGCGGAGGTAATACAT 55944
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGT 203954
||||||||| || ||| || ||| || | ||||||| | | |||| || |||
Sbjct 55945 GCCGGTCTTCAGACCCAACTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGT 56004
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
|||| || |||||| ||||||| |||||| ||| || ||||| ||| || |||||
Sbjct 56005 TGGG-TCCCTCATGTGGATGTTCATCGACTGGGATTGATCAATGAA-GGCACCACGATCA 56062
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
|| ||||| | || || ||| || || |||||||| ||||||||| ||| | ||
Sbjct 56063 GCAGCCATCTGGACGATCGTCCGTTGAGAGATCTCCCAGACCGTCTTGTACAGAGCCTTG 56122
Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132
||| || | || | | || ||| || ||||| || || || | | |
Sbjct 56123 ATGTCGGCTGGGATAT-TGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGGTT 56181
Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192
|| | | || ||| | |||| | || ||| | || |||||||
Sbjct 56182 TTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGAGGAGCCAAGGGTTGAC 56241
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
|| || || ||||| | |||||| | || | | | | |||| |||| |||| |||||
Sbjct 56242 GACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGCTCGAA 56301
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||| ||| | ||||||| ||||||||| || ||||||||||||| ||| ||
Sbjct 56302 GCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACGAGGAG 56361
Query 204313 GGAGTTGCGCACACCGT 204329
|||||||| |||||||
Sbjct 56362 AGAGTTGCGGACACCGT 56378
>seq153
Length=80566
Score = 120 bits (132), Expect = 5e-22
Identities = 332/497 (67%), Gaps = 9/497 (2%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCAC-GGCAGGCCTGCTTCTCAGATAGTACAT 203895
||||| || || |||||||| || | || | ||| | | || | | || || |||||
Sbjct 59383 TCTTGATCGACGGTGAACTGGATCG-GTGCGGTGGCTGCCATGGTGCGGAGGTAATACAT 59441
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGT 203954
||||||||| || ||| || ||| || | ||||||| | | |||| || |||
Sbjct 59442 GCCGGTCTTCAGACCCAACTTCCAGCCAGTGAAGTGCATGCTGGTGATCTTGCCCATCGT 59501
Query 203955 TGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCT 204013
|||| || |||||| ||||||| |||||| ||| || ||||| ||| || |||||
Sbjct 59502 TGGG-TCCTTCATGTGGATGTTCATCGACTGGGATTGATCAATGAA-GGCACCACGATCA 59559
Query 204014 GCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTG 204073
|| ||||| | || || ||| || || |||||||| ||||||||| ||| | ||
Sbjct 59560 GCAGCCATCTGGACGATCGTCCGTTGAGAGATCTCCCAGACCGTCTTGTACAGAGCCTTG 59619
Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132
||| || | || | | || ||| || ||||| || || || | | |
Sbjct 59620 ATGTCGGCTGGGATAT-TGGGGATGTTCTGGATGGAGCCACCCTCAGCGATGATGCGGTT 59678
Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192
|| | | || ||| | |||| | || ||| | || |||||||
Sbjct 59679 TTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGAGGAGCCAAGGGTTGAC 59738
Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252
|| || || ||||| | |||||| | || | | | | |||| |||| |||| |||||
Sbjct 59739 GACTTGGAATTCTCCAGCCAGCACACGACGAGAGTAAATGTTGGAGGTGTATGGCTCGAA 59798
Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312
|||||| ||| | ||||||| ||||||||| || ||||||||||||| ||| ||
Sbjct 59799 GCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCATGGGAGCCACGAGGAG 59858
Query 204313 GGAGTTGCGCACACCGT 204329
|||||||| |||||||
Sbjct 59859 AGAGTTGCGGACACCGT 59875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795145121407840
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