Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq102 116 4e-21
seq38 116 4e-21
seq59 107 2e-18
seq10 107 2e-18
seq96 105 8e-18
seq7 100 3e-16
>seq102
Length=175646
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| ||||| || ||||| |||| ||||| ||||||||||||||
Sbjct 56173 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAA 56232
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||| |||||||||| || | | |||||||| |||||| |||| |
Sbjct 56233 GATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTTGACATT 56292
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || ||||| || | ||||| || |||||||| || || || ||
Sbjct 56293 GTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC 56352
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 56353 GAAGATCTGCAT 56364
>seq38
Length=423541
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| ||||| || ||||| |||| ||||| ||||||||||||||
Sbjct 319985 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAA 320044
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||| |||||||||| || | | |||||||| |||||| |||| |
Sbjct 320045 GATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTTGACATT 320104
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || ||||| || | ||||| || |||||||| || || || ||
Sbjct 320105 GTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC 320164
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 320165 GAAGATCTGCAT 320176
>seq59
Length=321881
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| |||||||| || |||||||| |||| || || ||||| |||||||| |
Sbjct 265768 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 265827
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||||||||||| | || | | |||||||||| |||||| |||| |
Sbjct 265828 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 265887
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| || || || || | |||||||| |||||||| || || || || |
Sbjct 265888 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 265947
Query 46584 AG 46585
||
Sbjct 265948 AG 265949
>seq10
Length=717553
Score = 107 bits (118), Expect = 2e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| |||||||| || |||||||| |||| || || ||||| |||||||| |
Sbjct 20116 CCTTCTGGATGTTGTAGTCTGAAAGAGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAGA 20057
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||||||||||| | || | | |||||||||| |||||| |||| |
Sbjct 20056 TCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGT 19997
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| || || || || | |||||||| |||||||| || || || || |
Sbjct 19996 CGATTGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGA 19937
Query 46584 AG 46585
||
Sbjct 19936 AG 19935
>seq96
Length=182788
Score = 105 bits (116), Expect = 8e-18
Identities = 124/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| |||||||| |||| || || |||||||| |||||
Sbjct 166116 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGTTGCTTGCCCGCGAA 166057
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| || |||||||| | || | || ||||||||| |||||| ||||| |
Sbjct 166056 GATCAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACATT 165997
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | ||||| ||||| || || | |||||||| ||||| ||
Sbjct 165996 GTCGATGGTGTCAGAGGATTCAACCTCAAGAGTGATGGTCTTGCCGGT 165949
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| ||| || | | |||||| |||| |||| || |||||||||||||| |||||
Sbjct 166897 TATTGGCCGCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAA 166838
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
||| | ||||| | || || | |||||| || || || ||||| |||||||||||
Sbjct 166837 TCGCTCAAGGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCC 166778
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT 46540
| || | || ||||| ||| |||||| ||| | | | | ||||| ||
Sbjct 166777 GGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGAC 166718
Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | ||||| || || || |||| || || || ||||| |||||
Sbjct 166717 TCAACTTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 166665
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || || || | || ||||| |||||||| |||||
Sbjct 166400 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAA 166341
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| || || || || | || | | ||||||||| ||||||| ||||| |
Sbjct 166340 GATCAGACGTTGTTGATCAGGGGGAATACCCTCCTTGTCTTGGATCTTCGACTTGACATT 166281
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| ||||| || || | |||||||| ||||| || || || || ||
Sbjct 166280 GTCGATGGTGTCAGAGGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 166221
Query 46582 AA 46583
||
Sbjct 166220 AA 166219
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| ||||||||||| | || || | || |||||||||||||| || ||
Sbjct 166627 TCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGCTGCTTGCCAGCAAAA 166568
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | || || || || | || | || ||||| || ||||| |||| |||
Sbjct 166567 ATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGA-CGTT 166509
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||| || || ||||| |||| ||||| || ||||| || || || || ||
Sbjct 166508 GTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGAC 166449
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 166448 GAAGATTTGCAT 166437
>seq7
Length=756160
Score = 100 bits (110), Expect = 3e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| |||||| | | |||||| |||| |||| || |||||||||||||| |||||
Sbjct 415890 TATTGGCCTCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAA 415831
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
||| | ||||| | || || || ||||| || ||||| ||||| || ||||||||
Sbjct 415830 TCGCTCAAGGTGCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCC 415771
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT 46540
| || | || ||||| ||| |||||| ||| | | | | ||||| ||
Sbjct 415770 GGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGAC 415711
Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | ||||| || || || |||| || || || ||||| |||||
Sbjct 415710 TCAACTTCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 415658
Score = 89.7 bits (98), Expect = 6e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || || || | || ||||| |||||||| |||||
Sbjct 415393 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCAGCGAA 415334
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| || || || || | || | | ||||||||| ||||||| ||||| |
Sbjct 415333 GATCAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACATT 415274
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || || ||||| || || | |||||||| ||||| || || || || ||
Sbjct 415273 GTCGATGGTATCAGAAGATTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 415214
Query 46582 AA 46583
||
Sbjct 415213 AA 415212
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| ||||||||||| | || || | || ||||| |||||||| |||||
Sbjct 415620 TCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCATCCTCGAGTTGCTTGCCAGCGAAA 415561
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | || || || || | || | || ||||| || ||||| |||| |||
Sbjct 415560 ATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTTGA-CGTT 415502
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||| || |||||||| |||| || || || ||||| || || || || ||
Sbjct 415501 GTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGAC 415442
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 415441 GAAGATTTGCAT 415430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565231235603280
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