Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq153 273 3e-68 seq155 141 1e-28 seq75 120 4e-22 seq15 120 4e-22 seq49 86.0 8e-12 >seq153 Length=80566 Score = 273 bits (302), Expect = 3e-68 Identities = 1133/1750 (65%), Gaps = 53/1750 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| || ||||| ||||||| || || | || || || || || ||||| || | | Sbjct 61152 CCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGAGGCGGC 61093 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | | ||||||||| || ||||||| | | |||| |||||| | || || ||||| Sbjct 61092 TATCGAGACATACAACTTGATGTCCAGCAAATTCTTCACTCACGCATCTCCCACTCTCTT 61033 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 | || ||||| ||| ||||| | || || ||||| || | | |||||||| Sbjct 61032 CTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATGAAGGAGGA 60973 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||| || | ||||| ||||||||| ||||| Sbjct 60972 CAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAGAATGCTGG 60913 Query 111851 TGGTATCGGGATGCACATCCAT-GATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAA 111909 || ||||| | ||||||| || || | || | | | | || ||||||| Sbjct 60912 AGGCATCGGTCTCAACATCCACAGAATTCGG-GCTACCGGGGCCTACATCGCCGGTACAA 60854 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 |||| | || |||| ||| | || ||||| || || || ||| ||| || | || | Sbjct 60853 ATGGAAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCAAGATACG 60794 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | | || | ||| ||||| |||| | | || |||| || |||||||||| Sbjct 60793 TCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATCTACCTCGAGCCATGGC 60737 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 | |||||| || | ||||||||||| | || ||||| || | ||||| | || | Sbjct 60736 ATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAAGTTCG-T 60678 Query 112084 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 || ||||||||||||| ||| || |||||||| ||||||||||||||| | |||||| || Sbjct 60677 GCACGCGATCTCTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGAAG 60618 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | || | ||| |||| | || || || || || ||||| || | || | || Sbjct 60617 AACGGAGACTGGACTCTGATGTGCCCCAACGAATGC-CCCGGCCTGGCAGACGTTTACGG 60559 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACG 112259 || ||||| || || |||||| || |||||| |||| || || | | || ||| Sbjct 60558 GGATGAGTTCGAGGCTCTCTACGAGAAATACGAGAGAGAAGGTAAGG-GTC-GCAAGACT 60501 Query 112260 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | ||| | | ||| | | || ||| || | ||||||||||| || | || Sbjct 60500 ATCAAGGCTCAGAAACTCTGGTACTCCATCCTCGAGGCCCAAACCGAGACCGGGAACCCC 60441 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| || || || |||| |||||| || || ||||| |||| ||| Sbjct 60440 TTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGCAACCAGAAGAACCTGGGAACAATC 60381 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || |||||||| || |||||||| |||| | | | | ||||||| ||||| Sbjct 60380 CGAAGCTCCAACCTGTGCACAGAAATTGTGGAGTACTCTGCCCCAGATGAGGTAGCTGTC 60321 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTG 112497 || ||| | || || |||| || || | | || || || |||| | || | | Sbjct 60320 TGCAACTTGGCTTCTCTCGCCCTGCCAACCTTCGTTGA--CATGAACAACGGCACCTACG 60263 Query 112498 ATTATGAAAAACTCCACGAAGT-TACGAAAAC--TGTCACAAAAAACCTAAACAGAGTTA 112554 | | | || || ||||| || | | || | |||| || ||||| |||| | | Sbjct 60262 ACTTCCAGAAGCTTCACGAGGTGTGCCAAGTCGTTGTC---AAGAACCTGAACAAGATCA 60206 Query 112555 TTGATAGAAATTTTTACCCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 | |||| |||| ||||| ||| ||| ||| | || || | |||| || || Sbjct 60205 TCGATATCAATTACTACCCTGTTCCAGA-GGCTAGAAAGAGCAACCTCCGACATCGCCCC 60147 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGAT 112673 || | | | ||||| |||||||| || |||| ||| || | ||| | || || Sbjct 60146 ATCGCTGTGGGTGTTCAAGGTCTTGCTGATGCGTTCCTTGCTCTCCGCTTACCTTTCGAA 60087 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT- 112732 || ||| || ||| | |||| || || |||||||| || |||||||||||||| Sbjct 60086 TCGCCCGAGGCCAAGTACCTCAACAAGCAAATCTTTGAGACCATCTATCACGCCGCTCTC 60027 Query 112733 --TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || || ||| ||| | || |||| |||| || || || || | ||||| || Sbjct 60026 ACTGCATCG-GTT--GAGCTTGCCAAGGTGCATGGACCTTACGAGACATACGAGGGCTCG 59970 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACT 112848 |||| || | || | ||| |||| || ||||||| || | || | || | || Sbjct 59969 CCAGTATCGAAGGGAGAGCTCCAATACGACATGTGGG-GTGTCACGCCTA-CTGACCTCT 59912 Query 112849 ACGACTGGGAC-GCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 112907 || |||||| ||| | ||| | | || | || | ||| | || ||| ||| | Sbjct 59911 GGGATTGGGACAGCT-TAAAGCAGCAGATTGCGCAGCACGGTGTCCGCAACTCTCTCCTC 59853 Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967 |||| || |||||||| ||| |||| || || |||| || |||||||| || Sbjct 59852 GTGGCTCCCATGCCAACTGCCAGCACCAGTCAGATTCTGGGCTTCAACGAATGCTTCGAG 59793 Query 112968 CCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026 || ||||| | ||||| || ||| | | || || ||||| || | ||||| Sbjct 59792 CCATACACCTCCAACATTTACTCT-CGTCGTGTGCTGGCTGGAGAATTCCAAGTCGTCAA 59734 Query 113027 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 113086 | ||| | | || ||| || || ||||||||||| | | ||||| | | Sbjct 59733 CCCTTGGCTCCTCAAGGATCTCGTGGACATGGGTCTCTGGTCTGACAACATGAAAAACCG 59674 Query 113087 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 ||| | | |||||| ||||| || || || |||| |||| || || ||| Sbjct 59673 CATCATCGCTGAGGGTGGCTCCATCCAGAACATCCCCAATATCCCAGCCGACATCAAGGC 59614 Query 113147 GTTGTACCGCACAGTTTGGGAAATCAAGATGAA-GGATG-TCATTGACATGGCCGCAGAT 113204 ||||| || || ||||| ||| | || ||| | || | | ||||| || ||| Sbjct 59613 TCTGTACAAGACGGTCTGGGAGATC--TCTCAACGGACGATCGTCCAGATGGCTGCTGAT 59556 Query 113205 CGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGA 113262 |||||| ||||||||||||| || ||| ||||| | |||| | ||||||| Sbjct 59555 CGTGGTGCCTTCATTGATCAA--TCCCAGTCGATGAACATCCACATGAAGGACCCAACGA 59498 Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 113322 || |||| || | |||||| | | |||||| |||||| || || || |||| Sbjct 59497 TGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGTTGGGTCTGAAGACCGGCATGT 59438 Query 113323 ATTACCTCCG 113332 |||||||||| Sbjct 59437 ATTACCTCCG 59428 >seq155 Length=79386 Score = 141 bits (156), Expect = 1e-28 Identities = 369/557 (66%), Gaps = 13/557 (2%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| || ||||| ||||||| || || | || || || || || ||||| || | | Sbjct 57248 CCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGAGGCGGC 57189 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | | ||||| ||| || ||||||| | |||| || ||| | || || ||||| Sbjct 57188 TATCGAGACGTACAACTTGATGTCCAGCAAATACTTCACTCATGCATCTCCCACTCTCTT 57129 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 | || ||||| ||| ||||| | || || ||||| || | | |||||||| Sbjct 57128 CTCGGCCGGTACCCCACAGGCCCAACTTTCATCATGCTTCCTGATCGACATGAAGGAGGA 57069 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || | || || |||| ||| || | ||||| ||||||||| ||||| Sbjct 57068 CAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAGAATGCTGG 57009 Query 111851 TGGTATCGGGATGCACATCCAT-GATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAA 111909 || ||||| | ||||||| || || | || | | | | || ||||||| Sbjct 57008 AGGCATCGGTCTCAACATCCACAGAATTCGG-GCTACCGGGGCCTACATCGCCGGTACAA 56950 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 |||| | || |||| ||| | || ||||| || || || ||| ||| || | |||| Sbjct 56949 ATGGGAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCAAGATATG 56890 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | | || | ||| ||||| |||| | | || | || || |||||||||| Sbjct 56889 TCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATTTACCTCGAGCCATGGC 56833 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 | |||||| || | ||||||||||| | || ||||| || | ||||| | || | Sbjct 56832 ATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAAGTTCG-T 56774 Query 112084 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 || |||||||| |||| ||| || |||||||| ||||||||||||||| | |||||| || Sbjct 56773 GCACGCGATCTTTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGAAG 56714 Query 112143 AGTGGCAATTGGTCTCT 112159 | || | ||| |||| Sbjct 56713 AACGGAGACTGGACTCT 56697 >seq75 Length=245354 Score = 120 bits (132), Expect = 4e-22 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||||| || ||| | ||||| || || ||||| | | ||| || | |||| | | Sbjct 39011 AGTTCCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTC 39070 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | |||| || | || ||| | |||||||| || || |||||||| ||| ||||| Sbjct 39071 -TACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTT 39129 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 |||| |||| |||||| ||| | |||||||||||||| ||||| || ||| |||||| Sbjct 39130 CCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCA 39188 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||| | ||||| ||||| ||||| || ||| || ||||| Sbjct 39189 AACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 39232 >seq15 Length=607589 Score = 120 bits (132), Expect = 4e-22 Identities = 164/224 (73%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||||| || ||| | ||||| || || ||||| | | ||| || | |||| | | Sbjct 331207 AGTTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTC 331148 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | |||| || | || ||| | |||||||| || || |||||||| ||| ||||| Sbjct 331147 -TACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTT 331089 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 |||| |||| |||||| ||| | |||||||||||||| ||||| || ||| |||||| Sbjct 331088 CCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCA 331030 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||| | ||||| ||||| ||||| || ||| || ||||| Sbjct 331029 AACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 330986 >seq49 Length=368986 Score = 86.0 bits (94), Expect = 8e-12 Identities = 216/322 (67%), Gaps = 10/322 (3%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTG 16032 |||||||||||||| ||||| | |||||| | |||| ||| || ||||| || | | | Sbjct 112064 AAACCATCCATCTCAGTCAAGATCTGGTTCAGAGTTGCTTCTCGCTCATCGTTGCCACCG 112005 Query 16033 GCATACCACCAGCACT----GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACG 16088 | || | | || || || ||| || | ||| || || || || || |||| | Sbjct 112004 CCGAACGAACCGCCCTTTGCACGAGACTTCCCAATGGCGTCGATTTCGTCGATAAAGATG 111945 Query 16089 ATGCATGG-TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCAC 16147 || || || || | ||| | || | |||| ||||| ||||| | || || || Sbjct 111944 ATACAGGGAGTGCTCTTC-CTTGCCATCGCAAACAGATCACGTACTCTGGAAGCACCGAC 111886 Query 16148 ACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTAGATT 16206 ||| |||||||||||||| || | | || ||| | || ||| || || | |||| Sbjct 111885 ACCGACAAACATCTCCACGAACTCGGAACCGCTAACGCT-GAAGAATGGTACCTGCGATT 111827 Query 16207 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 16266 | || || | || || | || |||||||| |||||||| ||| | | || || Sbjct 111826 CTCCAGCCGTTGCCTTCGCCAAGAGCGTCTTACCAGTACCTGGTGGACCAGATAAGATGG 111767 Query 16267 CACCTCGTGGAATCTTGGCGCC 16288 ||||||| |||||||| || || Sbjct 111766 CACCTCGGGGAATCTTAGCACC 111745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734532090080