Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq153 275 7e-69 seq155 150 2e-31 seq75 107 2e-18 seq15 107 2e-18 >seq153 Length=80566 Score = 275 bits (304), Expect = 7e-69 Identities = 1172/1813 (65%), Gaps = 49/1813 (3%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| || ||||| |||||||| || || ||||| | | ||||| | | Sbjct 59428 CGGAGGTAATACATGCCGGTCTTCAGACCCAACTTCCAGCCAGTGAAGTGCATGCTGGTG 59487 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGA 105707 | |||| ||||||||| | |||| | ||||| ||| || | | ||||||| Sbjct 59488 ATCTTGCCCATCGTTGGGTCCTTCATGTGGATGTTCATCGACTGGGATT--GATCAATGA 59545 Query 105708 AGCGACCACGTTGTGCCGCCATATCAATGA-CATCC-TTCATCTTGATTTCCCACACTGT 105765 || |||||| | || ||||| | | || | ||| || | ||| ||||| || || Sbjct 59546 AGGCACCACGATCAGCAGCCATCTGGACGATCGTCCGTTGAGA--GATCTCCCAGACCGT 59603 Query 105766 GCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGC 105825 ||| ||| |||||| || ||||||||| | ||| || || || || || ||| | Sbjct 59604 CTTGTACAGAGCCTTGATGTCGGCTGGGATATTGGGGATGTTCTGGATGGAGCCACCCTC 59663 Query 105826 CTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGAC 105885 || ||| | | ||||| | | ||||| ||||| || | | |||||| |||| Sbjct 59664 AGCGATGATGCGGTTTTTCATGTTGTCAGACCAGAGACCCATGTCCACGAGATCCTTGAG 59723 Query 105886 GAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCG 105944 ||| |||||| | || ||||| || || | | ||| || ||||| | Sbjct 59724 GAGCCAAGGGTTGACGACTTGGAATTCTCCAGCCAGCACACGACG-AGAGTAAATGTTGG 59782 Query 105945 TCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCA 106004 ||||| || || |||||||| || |||| || || |||| ||| ||||||| Sbjct 59783 AGGTGTATGGCTCGAAGCATTCGTTGAAGCCCAGAATCTGACTGGTGCTGGCAGTTGGCA 59842 Query 106005 TTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACAT 106064 | || |||| | ||| ||| || | ||| | | | || | | ||| | | Sbjct 59843 TGGGAGCCACGAGGAGAGAGTTGCGGACACCGTGCTGCGCAATCTGCTGCTTTAAGCTGT 59902 Query 106065 CCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122 |||| || || | || | || | || ||||||| || |||| ||| | || | Sbjct 59903 CCCAATCCCAGAGGTCAG-TAGGCGTGACAC-CCCACATGTCGTATTGGAGCTCTCCCTT 59960 Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCA-CAGC 106181 || || || ||||| ||||||| || | || || | | || | ||| | | Sbjct 59961 CGATACTGGCGAGCCCTCGTATGTCTCGTAAGGTCCATGCACCTTGGCAAGCTCAACCGA 60020 Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241 | || || | |||||||| ||||| |||||||| | || | | |||||| | Sbjct 60021 T-GCAGTGAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCT 60079 Query 106242 CATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCA 106301 | || || || | ||||| || || |||| || |||||||||||||||| Sbjct 60080 CGGGCGATTCGAAAGGTAAGCGGAGAGCAAGGAACGCATCAGCAAGACCTTGAACACCCA 60139 Query 106302 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC-AACGGGATAAAAATTT 106360 | | || || | ||||| | || ||||| || ||| ||| || || |||| Sbjct 60140 CAGCGATGGGGCGATGTCGGAGGTTGCTCTTTCTAGCC-TCTGGAACAGGGTAGTAATTG 60198 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG-ATTTCATGAAGTTTTTC 106419 | || |||| ||| || || ||| ||| | ||| | | || ||||| || | Sbjct 60199 ATATCGATGATCTTGTTCAGGTTCTTGACAACGA-CTTGGCACACCTCGTGAAGCTTCTG 60257 Query 106420 ATAATCAAAAGTGCGAGTCTCTTCATTG--ACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | || | |||| || | ||||| || | |||| ||||||| || ||||| Sbjct 60258 GAAGTCGTAGGTGCC-GT-TGTTCATGTCAACGAAGGTTGGCAGGGCGAGAGAAGCCAAG 60315 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||| ||||| |||||| | | |||||| | ||||||||| |||| |||||| Sbjct 60316 TTGCAGACAGCTACCTCATCTGGGGCAGAGTACTCCACAATTTCTGTGCACAGGTTGGAG 60375 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || |||| ||||| ||||| |||||| |||||| ||||||||||||||| Sbjct 60376 CTTCGGATTGTTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGC 60435 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656 ||| |||| |||| ||||| || || | || ||| || | | ||| | || | | | Sbjct 60436 ATGAAGGGGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGAGTTTCTGAGCC 60495 Query 106657 -TGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 || || | || | ||| | ||| | | |||||| || |||||| || || ||| Sbjct 60496 TTGATAGTCTTGC---GACCCTTACCTTCTCTCTCGTATTTCTCGTAGAGAGCCTCGAAC 60552 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773 || || || |||| | || || || || || || || || | |||| ||| | Sbjct 60553 TCATCCCCGTAAACGTCTGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAGTC 60611 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 || || |||||| ||||||||||| || || ||||||||||||| | |||||||| Sbjct 60612 TCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATC 60671 Query 106834 TC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 106892 | | || ||| | || || | || ||||| ||| | ||||||||||| | || || Sbjct 60672 GCGTGCA-CGAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACAT 60730 Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTT 106946 |||| ||||||||||| || |||| || | | |||| ||||| ||| | | Sbjct 60731 CCGCATGCCATGGCTCGAGGTAGATGGCAAACGCTCCC---GGACGCTTGTTTCCACCCT 60787 Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006 ||| || || | || ||| ||| || || || ||||| || | ||| |||| || | Sbjct 60788 GATCGACGTATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGT 60847 Query 107007 GACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAA 107066 |||||||| || || | | || | | ||||||| | || | Sbjct 60848 TTCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACCGA 60907 Query 107067 TACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGA 107126 | || ||||| ||||||||| ||||| | | || || | |||||||||| | Sbjct 60908 TGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAA 60967 Query 107127 TTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCA 107185 | ||||||||| || |||| |||||||| || | || || || ||| ||||| Sbjct 60968 TACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTG-GGCCTGTGGGGTACCG 61026 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTATG 107243 || |||||| || || | ||||||| |||| | | || ||||||| || ||||| Sbjct 61027 GCCGAGAAGAGAGTGGGAGATGCGTGAGTGAAGAATTTGCT--GGACATCAAGTTGTATG 61084 Query 107244 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 |||| | | | || || || || ||||| || || | ||||| ||||| | ||||| Sbjct 61085 TCTCGATAGCCGCCTCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGT 61144 Query 107304 ATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTT 107363 ||| || || | |||||||||| ||| |||| || | ||| ||||| | Sbjct 61145 GTTGAGGGCGCTCAGCAACCTTGCCATCGAGGCGTAGAAGGTATGACCGCTCCAGGGTCT 61204 Query 107364 TGAGACCAAAGTA 107376 ||| |||||||| Sbjct 61205 TGAATCCAAAGTA 61217 >seq155 Length=79386 Score = 150 bits (166), Expect = 2e-31 Identities = 403/607 (66%), Gaps = 17/607 (3%) Strand=Plus/Plus Query 106780 CTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TAC 106838 || |||||| ||||||||||| || || ||||||||||||| | || ||||| | | | Sbjct 56714 CTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAAAGATCGCGTGC 56773 Query 106839 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 106898 | ||| | || || | || ||||| ||| | ||||||||||| | || |||||| | Sbjct 56774 A-CGAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCAT 56832 Query 106899 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTA 106952 |||||||||| || || | || | | |||| ||||| ||| | |||| | Sbjct 56833 GCCATGGCTCGAGGTAAATGGCAAACGCTCCC---GGACGCTTGTTTCCACCCTGATCGA 56889 Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012 |||| | || ||| ||| || || || ||||| || | ||| |||| || | |||| Sbjct 56890 CATATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTTCCCAT 56949 Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072 |||| || || | | || | | ||||||| | || || || | Sbjct 56950 TTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACCGATGCCTC 57009 Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132 |||| ||||||||| ||||| | | || || | |||||||||| || || Sbjct 57010 CAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGT 57069 Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTG 107191 ||||||| || |||| |||||||| || | || || || ||| ||||| || | Sbjct 57070 CCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTG-GGCCTGTGGGGTACCGGCCGAG 57128 Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCA 107249 ||||| || || | ||| ||| |||| || ||| ||||||| || ||| ||||| | Sbjct 57129 AAGAGAGTGGGAGATGCATGAGTGAA-GTA-TTTGCTGGACATCAAGTTGTACGTCTCGA 57186 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309 | | || || || || ||||| || || | ||||| ||||| | ||||| ||| | Sbjct 57187 TAGCCGCCTCGATATCATCACCGTGAATTCCAACTGCCACTCGCATGATCATGTGTTGAG 57246 Query 107310 GTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGAC 107369 | || | |||||||||| ||| |||| || | ||| ||||| |||| | Sbjct 57247 GGCGCTCAGCAACTTTGCCATCGAGGCGTAGAAGGTATGACCGCTCCAGGGTCTTGAATC 57306 Query 107370 CAAAGTA 107376 ||||||| Sbjct 57307 CAAAGTA 57313 >seq75 Length=245354 Score = 107 bits (118), Expect = 2e-18 Identities = 161/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| || |||||||| || || || | || ||||||||| || || Sbjct 39232 GCAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCG 39173 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| ||||| |||||||||||||| |||||| |||| || || || ||| ||||| Sbjct 39172 GGCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCA-AAGGAACCACTGAAAAAGAT 39114 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449 ||| || || ||||| || | || || | |||||||| ||| || |||| Sbjct 39113 ACCTTCGACCGCAGCAAATGCCACGAGACGTTGGGCGAAGG---TAGAGTTCTTGTCCTG 39057 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 || |||| | | |||||| | |||||||||| ||| || || || Sbjct 39056 AATCCATCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAGGGAAC 39012 >seq15 Length=607589 Score = 107 bits (118), Expect = 2e-18 Identities = 161/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| || |||||||| || || || | || ||||||||| || || Sbjct 330986 GCAAAGTCGGTGTGAAGGCCCTCATCACGCGAGATCAACTCGTTTGAGAAGGTGAGTCCG 331045 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| ||||| |||||||||||||| |||||| |||| || || || ||| ||||| Sbjct 331046 GGCATCAGACCTCGCTTCTTCAACCAGAAAATAGACGCA-AAGGAACCACTGAAAAAGAT 331104 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449 ||| || || ||||| || | || || | |||||||| ||| || |||| Sbjct 331105 ACCTTCGACCGCAGCAAATGCCACGAGACGTTGGGCGAAGG---TAGAGTTCTTGTCCTG 331161 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 || |||| | | |||||| | |||||||||| ||| || || || Sbjct 331162 AATCCATCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAAC 331206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973321993360