Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq181 102 9e-17
>seq181
Length=52435
Score = 102 bits (112), Expect = 9e-17
Identities = 265/395 (67%), Gaps = 13/395 (3%)
Strand=Plus/Minus
Query 154719 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATG 154778
|| ||||| |||| ||| || || || || || || ||| ||||| |||||| || |||
Sbjct 3891 TGCTTGATCCCAGTGTCTGCTCACGGTACAAACCCAGCTTCTGCTGCCATGGCCGGCATG 3832
Query 154779 AAAGTTGTAGGTGTCAAGTGTGAT--GATGATGG-TAACATAGACATCAAAGATCTAGAG 154835
|| || | |||| || ||| || || || |||| ||||||| |||||| ||
Sbjct 3831 CGCGTCGTCACTATCAAATGCGATACGAAGACGGGTAACCTAGACATAGCAGATCTGAAG 3772
Query 154836 AAGAAAGCAATCATGAATACATTTGAACTGTCATGT----ATTATGATTACATACCCATC 154891
||| | | |||||| | ||| | | || || |||||||| || ||
Sbjct 3771 TCGAAGTG--TGAGAAATACAGT-GAAGAG-CTTGGCGCCATCATGATTACGTATCCTAG 3716
Query 154892 TACACATGGTGTATTTGAAACTAACATTA-GACAGATATGTAAGATCGTTCATGACAATG 154950
|| |||||| ||||| | | | | | | | || | ||||||||||| |||
Sbjct 3715 CACCTTTGGTGTTTTTGAGCCCGAGGTCAAGGCTGCGATCGAT-ATCGTTCATGAACATG 3657
Query 154951 GTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCAT 155010
|||| ||||| || | ||||| |||||| | || || || | || || ||
Sbjct 3656 GTGGCCAGGTGTACATGGATGGTGCAAATATGAACGCCCAAATCGGTCTTTGCTCTCCGG 3597
Query 155011 GTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATG 155070
||||| ||| || ||||| || ||||| ||| | || || || |||||||| || ||||
Sbjct 3596 GTGAGATTGGAGCCGATGTCTGCCATCTCAACCTTCACAAGACTTTCTGTATCCCCCATG 3537
Query 155071 GAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTA 155105
| || || |||||||| || ||||| || ||||||
Sbjct 3536 GTGGCGGTGGTCCTGGTGTTGGTCCAATTGGTGTA 3502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579205458477760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |