Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq181 102 9e-17 >seq181 Length=52435 Score = 102 bits (112), Expect = 9e-17 Identities = 265/395 (67%), Gaps = 13/395 (3%) Strand=Plus/Minus Query 154719 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATG 154778 || ||||| |||| ||| || || || || || || ||| ||||| |||||| || ||| Sbjct 3891 TGCTTGATCCCAGTGTCTGCTCACGGTACAAACCCAGCTTCTGCTGCCATGGCCGGCATG 3832 Query 154779 AAAGTTGTAGGTGTCAAGTGTGAT--GATGATGG-TAACATAGACATCAAAGATCTAGAG 154835 || || | |||| || ||| || || || |||| ||||||| |||||| || Sbjct 3831 CGCGTCGTCACTATCAAATGCGATACGAAGACGGGTAACCTAGACATAGCAGATCTGAAG 3772 Query 154836 AAGAAAGCAATCATGAATACATTTGAACTGTCATGT----ATTATGATTACATACCCATC 154891 ||| | | |||||| | ||| | | || || |||||||| || || Sbjct 3771 TCGAAGTG--TGAGAAATACAGT-GAAGAG-CTTGGCGCCATCATGATTACGTATCCTAG 3716 Query 154892 TACACATGGTGTATTTGAAACTAACATTA-GACAGATATGTAAGATCGTTCATGACAATG 154950 || |||||| ||||| | | | | | | | || | ||||||||||| ||| Sbjct 3715 CACCTTTGGTGTTTTTGAGCCCGAGGTCAAGGCTGCGATCGAT-ATCGTTCATGAACATG 3657 Query 154951 GTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCAT 155010 |||| ||||| || | ||||| |||||| | || || || | || || || Sbjct 3656 GTGGCCAGGTGTACATGGATGGTGCAAATATGAACGCCCAAATCGGTCTTTGCTCTCCGG 3597 Query 155011 GTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATG 155070 ||||| ||| || ||||| || ||||| ||| | || || || |||||||| || |||| Sbjct 3596 GTGAGATTGGAGCCGATGTCTGCCATCTCAACCTTCACAAGACTTTCTGTATCCCCCATG 3537 Query 155071 GAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTA 155105 | || || |||||||| || ||||| || |||||| Sbjct 3536 GTGGCGGTGGTCCTGGTGTTGGTCCAATTGGTGTA 3502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579205458477760