Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq181 111 2e-19
seq57 105 8e-18
>seq181
Length=52435
Score = 111 bits (122), Expect = 2e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669
|| |||||||| ||||||| ||||| || | |||||||||||| | || || || |
Sbjct 3672 ATCGTTCATGAACATGGTGGCCAGGTGTACATGGATGGTGCAAATATGAACGCCCAAATC 3613
Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729
||||| || |||| ||| || ||||| || ||||| ||| | || |||||
Sbjct 3612 GGTCTTTGCTCTCCGGGTGAGATTGGAGCCGATGTCTGCCATCTCAACCTTCACAAGACT 3553
Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780
|||||||| || ||||| || || |||||||| || ||||| |||||||||
Sbjct 3552 TTCTGTATCCCCCATGGTGGCGGTGGTCCTGGTGTTGGTCCAATTGGTGTA 3502
>seq57
Length=326045
Score = 105 bits (116), Expect = 8e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669
|| |||||| | ||||||| ||||| || | |||||||||||| | || || || |
Sbjct 58141 ATCGTTCATCAACATGGTGGCCAGGTGTACATGGATGGTGCAAATATGAACGCCCAAATC 58200
Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729
||||| || |||| ||| || ||||| || ||||| ||| | || |||||
Sbjct 58201 GGTCTTTGCTCTCCGGGTGAGATTGGAGCCGATGTCTGCCATCTCAACCTTCACAAGACT 58260
Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780
|||||||| || ||||| || || |||||||| || ||||| |||||||||
Sbjct 58261 TTCTGTATCCCCCATGGTGGCGGTGGTCCTGGTGTTGGTCCAATTGGTGTA 58311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588043746451040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |