Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq102 156 9e-33 seq38 156 9e-33 seq7 149 1e-30 seq96 143 6e-29 seq153 98.7 2e-15 seq173 87.8 4e-12 >seq102 Length=175646 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || || || |||||||||| ||| || | || |||||| Sbjct 56156 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCG 56215 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || ||||| ||||| || || || ||||| |||||||| Sbjct 56216 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 56275 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||| || ||||||||||| ||| ||||| |||||||| | ||||| Sbjct 56276 ATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTG 56335 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 56336 CCCGTGAGGGTCTTGACGAAGATCTGCAT 56364 >seq38 Length=423541 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || || || |||||||||| ||| || | || |||||| Sbjct 319968 ACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCG 320027 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || ||||| ||||| || || || ||||| |||||||| Sbjct 320028 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGG 320087 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||| || ||||||||||| ||| ||||| |||||||| | ||||| Sbjct 320088 ATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTG 320147 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 320148 CCCGTGAGGGTCTTGACGAAGATCTGCAT 320176 >seq7 Length=756160 Score = 149 bits (164), Expect = 1e-30 Identities = 161/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | ||| || || || || ||||| || ||||| |||| |||| |||| ||||| | Sbjct 415639 AACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCGACCATCCT 415581 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||| ||||| || ||||| || || |||||||| || || ||||||||||| || |||| Sbjct 415580 CGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTT 415521 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 |||| ||| |||||||| || || || ||||| ||||||||| | |||| |||| Sbjct 415520 GAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCT 415461 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | ||| || ||||| | |||||| Sbjct 415460 TGCCGGTGAGAGTCTTGACGAAGATTTGCAT 415430 Score = 131 bits (144), Expect = 4e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||| || || || ||||| || | ||||| | || || || Sbjct 415126 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCA 415067 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || ||||| ||||| ||||||||||| || |||||||| Sbjct 415066 AGTTGCTTGCCCGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 415007 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| || ||| || ||||| || | ||||| Sbjct 415006 ATCTTGGACTTGACATTGTCGATGGTGTCGGAGGATTCAACCTCAAGAGTGATGGTCTTG 414947 Query 195112 CCTGT 195116 || || Sbjct 414946 CCGGT 414942 >seq96 Length=182788 Score = 143 bits (158), Expect = 6e-29 Identities = 160/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | ||| ||||| || || ||||| || ||||| |||| |||| |||| ||||| | Sbjct 166646 AACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAG-GTTCGACCATCCT 166588 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||||||||| || || || || || |||||||| || || ||||||||||| || |||| Sbjct 166587 CGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTT 166528 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 |||| ||| |||||||| || || || ||||| |||||||| | || | |||| Sbjct 166527 GAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCT 166468 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | ||| || ||||| | |||||| Sbjct 166467 TGCCGGTGAGAGTCTTGACGAAGATTTGCAT 166437 >seq153 Length=80566 Score = 98.7 bits (108), Expect = 2e-15 Identities = 192/281 (68%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||||||| | |||| | ||||||| ||||||||| | || | | || || || ||| Sbjct 60665 TTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTTGAGAAGAACGGAGACTGG 60606 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || | || ||||| ||| || || || | || ||||| || ||||||||| Sbjct 60605 ACTCTGATGTGCCCCAACGAATGCCCCGGCCTGGCAGACGTTTACGGGGATGAGTTCGAG 60546 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGG-AAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767 |||| || || | |||||| | ||| || ||| | | || | | ||||| || | Sbjct 60545 GCTCTCTACGAGAAATACGAGAGAGAAGGTAAGGGTCGCAAGACTA-TCAAGGCTCAGAA 60487 Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827 ||| ||| | |||||| | |||||| |||| || | ||||| || ||||| Sbjct 60486 ACTCTGGTACTCCATCCTCGAGGCCCAAACCGAGACCGGGAACCCCTTCATGCTCTACAA 60427 Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 |||||| | || ||||| |||||||||||| | |||| Sbjct 60426 GGATGCTTGCAACCGAAAGAGCAACCAGAAGAACCTGGGAA 60386 >seq173 Length=62178 Score = 87.8 bits (96), Expect = 4e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 32299 CTCAAGCATATGGTGACAGACAAGATGCATGCGAGAGCGACTGGA-AAGATCCAAAGTCT 32357 |||||||| ||||| |||||||||||| ||||| | | ||| | | | || ||| Sbjct 15419 CTCAAGCACATGGTTCAAGACAAGATGCACTCGAGATCTAGAGGACCACGTGC-AATTCT 15477 Query 32358 CACTCGTCAACCAACTGAGGGGCGATCTAGAAACGGGGGCCTTAAAATCGGATCGATGGA 32417 ||||| ||||| || || || ||||| ||| |||| || |||| | | ||| |||||| Sbjct 15478 TACTCGGCAACCTACAGAAGGCCGATCGAGAGACGGAGGTCTTAGATTGGGAGAGATGGA 15537 Query 32418 AAGGGATTGTCTTGTGGGGAATGGAGCGACTC 32449 ||| |||||||| | | | | ||||||| || Sbjct 15538 AAGAGATTGTCTGATCGCGTACGGAGCGAGTC 15569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109467185753738