Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq153 156 8e-33
seq15 131 3e-25
seq75 122 2e-22
seq155 111 3e-19
>seq153
Length=80566
Score = 156 bits (172), Expect = 8e-33
Identities = 789/1243 (63%), Gaps = 51/1243 (4%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476
|| || || ||||| ||||||||||||||||| ||||||||| ||||||||||||
Sbjct 60025 GTGAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCTCGGGC 60084
Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536
|| ||| || | || || | || | || || || || || || || | | ||
Sbjct 60085 GATTCGAAAGGTAAGCGGAGAGCAAGGAACGCATCAGCAAGACCTTGAACACCCACAGCG 60144
Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596
||||| | |||| |||| || ||||| || || || | |||| |||
Sbjct 60145 ATGGGGCGATGTCGGAGGTTGCTCTTTCTAGCCTCTGGAACAGGGTAGTAATTGATATCG 60204
Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656
|| | ||||| |||||| | ||||| ||||||| ||||||||| | |
Sbjct 60205 ATGATCTTGTTCAGGTTCTTGACAACGACTTGGCACACCTCGTGAAGCTTCTGGAAGTCG 60264
Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716
| | ||||| || | | || || || | ||||| | |||
Sbjct 60265 TA---------GGTGCCGTTGTTCATG---TCAACGAAGGTTGGCAGGGCGAGAGAAGCC 60312
Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776
| ||| || || || ||||| || | | |||| | || ||||| || ||||||
Sbjct 60313 AAGTTGCAGACAGCTACCTCATCTGGGGCAGAGTACTCCACAATTTCTGTGCACAGGTTG 60372
Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836
|| ||| || ||||||| || || || ||| || ||| ||| |||||||||
Sbjct 60373 GAGCTTCGGATTGTTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAG 60432
Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG 221896
||||| ||||| || ||||| || ||| | || || || |||||||| ||||
Sbjct 60433 AGCATGAAGGGGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGAGTT-TCTG 60491
Query 221897 -GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTC 221955
|| | | ||| | | ||| || ||| | | | || || ||||| | |
Sbjct 60492 AGCCTTGATAGTCTTGCGACCCTTACCTTCTCTCTCGTATTTCTCG-TAGAGAGCCT--C 60548
Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015
|||| || ||||| | || ||||||| || || | ||| ||||||||| ||||
Sbjct 60549 GAACTCATCCCCGTAAACGTCTGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCA 60608
Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075
|| ||| | | || | || ||||||||| || || |||||||| || | |||||
Sbjct 60609 GTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAG 60668
Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135
||| | | || ||||| || | ||| || | || || | |||||||| |
Sbjct 60669 ATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGAC 60728
Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195
|| || ||||| ||||| || |||| ||| | || || || |||||||| ||||||||
Sbjct 60729 ATCCGCATGCCATGGCTCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTG 60788
Query 222196 ATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254
||| || || | | | | |||||||| || || | || || | || |||||
Sbjct 60789 ATCGACGTATCT-TGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGT 60847
Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-----GCAGACAT 222309
|| || || || ||||| || ||| |||| | | ||| | || |
Sbjct 60848 TTCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCC---GAATTCTGTGGATGTTGAGA- 60903
Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369
||||| || || || | || |||||||| || ||| |||| || ||||| ||| ||
Sbjct 60904 -CCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACC 60962
Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA 222429
|| ||| ||||||||| | || | ||| || || || || | || | | | ||
Sbjct 60963 GTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGT 61022
Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTA 222489
|| ||| || || |||||| ||||| || ||| | || ||||||| | |||
Sbjct 61023 ACCGGCCGAGAAGAGAGTGGGAGATGCGTGAGTGAAGAATTTGCTGGACATCAAGTTGTA 61082
Query 222490 CGTCTCTA----CGACTCTGGCGATGTTGTCCCCGTGAATCTGCA--TGGCGCATCTCAT 222543
||||| | || || |||| | || |||||||| | || || | | || |||
Sbjct 61083 TGTCTCGATAGCCGCCT----CGATATCATCACCGTGAAT-TCCAACTGCCAC-TCGCAT 61136
Query 222544 GTACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAGCAGGTACGAT 222598
| ||||| || || | || ||| | ||||| ||| | ||| ||||| ||
Sbjct 61137 GATCATGTGTTGAGGGCGCT---CAGCAACCTTGCCATCGAGGCGTAGA--AGGTATGAC 61191
Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTC 222641
||||| |||||||| |||||||| | | || |||||||
Sbjct 61192 CGCTCCAGGGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCTC 61234
>seq15
Length=607589
Score = 131 bits (144), Expect = 3e-25
Identities = 334/512 (65%), Gaps = 9/512 (2%)
Strand=Plus/Minus
Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873
|||| |||| |||||| ||||| | | ||||| | | ||| | |||| || |
Sbjct 331199 GCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCTACCTTCG 331140
Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933
| | || || || || |||||||| || || || ||||||||||| ||||| ||||||
Sbjct 331139 CCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTTGCGT 331080
Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993
| || |||||| | ||| || || |||||||| || ||| || |||||| | |
Sbjct 331079 CTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAGTTGA 331020
Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGC 26053
|| | || ||||| || |||| || ||||| ||||| |||| | || ||||||
Sbjct 331019 TCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---CACTTGA 330963
Query 26054 TCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAG 26112
||| || |||| || ||||| | | | |||| ||||| || || ||||||
Sbjct 330962 AGCAC-CGCCCAAGCAAGCAGGCCGTCCAAGCTGTTATCACCGAGGCCGTCGAAATCGAG 330904
Query 26113 AAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATG 26172
| || || | || |||||| | ||||||
Sbjct 330903 CAAGAATTCTTAACCGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCTCATG 330844
Query 26173 AGCCAATACATTGAGTATGTGGCCGACCATCTGCT--GTGCCAGCTGGGACTCGCCAGAC 26230
| |||||||| || | ||| ||||| | |||||| |||| || ||| || |
Sbjct 330843 AAGCAATACATCGAATTTGTTGCCGATCGTCTGCTCCTTGCC--CTCGGAAACGAGAAGG 330786
Query 26231 TCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCA 26290
|||||| | | ||||| |||||||| ||||| ||||| || | | || |||||||
Sbjct 330785 TCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCA 330726
Query 26291 ACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
||||||| || ||| | ||||| ||||| |||
Sbjct 330725 ACTTCTTCGAGAAGCGTGTCGGTGACTACCAA 330694
>seq75
Length=245354
Score = 122 bits (134), Expect = 2e-22
Identities = 332/514 (65%), Gaps = 5/514 (1%)
Strand=Plus/Plus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869
||| |||| |||| |||||| ||||| | | ||||| | | ||| | ||||
Sbjct 39015 CCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCTACC 39074
Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929
|| | | | || || || || |||||||| || || || ||||||||||| ||||| |||
Sbjct 39075 TTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTT 39134
Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989
||| | || |||||| | ||| || || |||||||| || ||| || ||||||
Sbjct 39135 GCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAG 39194
Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCAC 26049
| ||| | || ||||| || |||| || ||||| ||||| |||| | || |||
Sbjct 39195 TTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---CAC 39251
Query 26050 TTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGAT 26108
||| ||| || |||| || ||||| | | | |||| ||||| || | ||
Sbjct 39252 TTGAAGCACCGTCC-AAGCAAGCAGGCCGTCCAAGATGTTATCACCGAGGCCGTCCAAAT 39310
Query 26109 CGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACT 26168
|||| | || || | || |||||| | ||
Sbjct 39311 CGAGCAAGAATTCTTAACCGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCT 39370
Query 26169 CATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAG 26228
|||| |||||||| |||| ||| ||||| | |||||| | || ||| | |
Sbjct 39371 AATGAAGCAATACATCGAGTTTGTTGCCGATCGTCTGCTTCTCGCCCTCGGAAATGAGAA 39430
Query 26229 ACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGAC 26288
|||||| | | ||||| |||||||| ||||| ||||| || | | || |||||
Sbjct 39431 GGTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGAC 39490
Query 26289 CAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
||||||||| || ||| | ||||| ||||| |||
Sbjct 39491 CAACTTCTTCGAGAAGCGTGTCGGTGACTACCAA 39524
Score = 107 bits (118), Expect = 4e-18
Identities = 182/259 (70%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || ||||||||||||||| ||||||||
Sbjct 38634 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAAATTGATCTC 38693
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-A 25595
|||||||| | ||| ||| || | ||| ||||| ||| || ||| | |
Sbjct 38694 TCCAAGGACCTTCACGATTGGAACAACAGACTCAACGACGACGAGCGTTACTTCATCTCA 38753
Query 25596 CGTGT--TGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
| ||| | |||||||| ||||| |||||||| || || |||||||| || |||| |
Sbjct 38754 CATGTCCTCGCATTCTTCGCAGCATCTGATGGAATTGTCAACGAGAACCTTGTCGAGCGC 38813
Query 25654 TTCACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
|||| | ||||| | | | | | ||||| || |||||||||||||| || ||
Sbjct 38814 TTCAGTGGTGAAGTTCAAATTCCT-GAGGCTCGATGCTTCTACGGTTTCCAAATCATGAT 38872
Query 25713 CGAAAATGTGCACTCTGAG 25731
|| || | |||||||||
Sbjct 38873 GGAGAACATCCACTCTGAG 38891
>seq155
Length=79386
Score = 111 bits (122), Expect = 3e-19
Identities = 427/660 (65%), Gaps = 32/660 (5%)
Strand=Plus/Plus
Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057
||| ||||||||| |||||| ||| | | || | || ||||||||| || || ||
Sbjct 56687 GGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAAT 56746
Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117
|||||| || | || ||||| | | || ||||| || | ||| || | ||
Sbjct 56747 CCACAGGGCGTAGAAAAGATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCGGAG 56806
Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177
|| | |||||||| | || || ||||| ||||| || || | ||| | || || ||
Sbjct 56807 GTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAAATGGCAAACGCTCCCGG 56866
Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236
|||||||| ||||||||||| | ||| | | | | |||||||| || || | |
Sbjct 56867 ACGCTTGTTTCCACCCTGATCGA-CATATCTTGCGGTGTTGTTGAAGACTCGGAGCATGG 56925
Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296
| || | || ||||| || || || || ||||| || ||| |||| |
Sbjct 56926 GCACAATGCCATTGGAGTTCCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCC---GAA 56982
Query 222297 TACTG-----GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTT 222351
| ||| | || | ||||| || || || | || |||||||| || ||| ||||
Sbjct 56983 TTCTGTGGATGTTGAGA--CCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTT 57040
Query 222352 GAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGA 222411
|| ||||| ||| || || ||| ||||||||| | || | ||| || || || ||
Sbjct 57041 TAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGA 57100
Query 222412 CATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCC 222471
| || | | | || || ||| || || |||||| || || || |||||
Sbjct 57101 AAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAGTGAAGTATTT 57160
Query 222472 CCTAGACATCAGATCGTACGTCTCTA----CGACTCTGGCGATGTTGTCCCCGTGAATCT 222527
|| ||||||| | ||||||||| | || || |||| | || |||||||| |
Sbjct 57161 GCTGGACATCAAGTTGTACGTCTCGATAGCCGCCT----CGATATCATCACCGTGAAT-T 57215
Query 222528 GCA--TGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGC 222581
|| || | | || |||| ||||| || || | ||| || || || | |||
Sbjct 57216 CCAACTGCCAC-TCGCATGATCATGTGTTGAGGGCGCTCAGCA--ACTTTGCCATCGAGG 57272
Query 222582 TGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTC 222641
| ||| ||||| || ||||| |||||||| |||||||| | | || |||||||
Sbjct 57273 CGTAGA--AGGTATGACCGCTCCAGGGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCTC 57330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928833026892160
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