Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq153 156 8e-33 seq15 131 3e-25 seq75 122 2e-22 seq155 111 3e-19 >seq153 Length=80566 Score = 156 bits (172), Expect = 8e-33 Identities = 789/1243 (63%), Gaps = 51/1243 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 || || || ||||| ||||||||||||||||| ||||||||| |||||||||||| Sbjct 60025 GTGAGAGCGGCGTGATAGATGGTCTCAAAGATTTGCTTGTTGAGGTACTTGGCCTCGGGC 60084 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || ||| || | || || | || | || || || || || || || | | || Sbjct 60085 GATTCGAAAGGTAAGCGGAGAGCAAGGAACGCATCAGCAAGACCTTGAACACCCACAGCG 60144 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||| | |||| |||| || ||||| || || || | |||| ||| Sbjct 60145 ATGGGGCGATGTCGGAGGTTGCTCTTTCTAGCCTCTGGAACAGGGTAGTAATTGATATCG 60204 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 || | ||||| |||||| | ||||| ||||||| ||||||||| | | Sbjct 60205 ATGATCTTGTTCAGGTTCTTGACAACGACTTGGCACACCTCGTGAAGCTTCTGGAAGTCG 60264 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 | | ||||| || | | || || || | ||||| | ||| Sbjct 60265 TA---------GGTGCCGTTGTTCATG---TCAACGAAGGTTGGCAGGGCGAGAGAAGCC 60312 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 | ||| || || || ||||| || | | |||| | || ||||| || |||||| Sbjct 60313 AAGTTGCAGACAGCTACCTCATCTGGGGCAGAGTACTCCACAATTTCTGTGCACAGGTTG 60372 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 || ||| || ||||||| || || || ||| || ||| ||| ||||||||| Sbjct 60373 GAGCTTCGGATTGTTCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAG 60432 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG 221896 ||||| ||||| || ||||| || ||| | || || || |||||||| |||| Sbjct 60433 AGCATGAAGGGGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTACCAGAGTT-TCTG 60491 Query 221897 -GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTC 221955 || | | ||| | | ||| || ||| | | | || || ||||| | | Sbjct 60492 AGCCTTGATAGTCTTGCGACCCTTACCTTCTCTCTCGTATTTCTCG-TAGAGAGCCT--C 60548 Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA 222015 |||| || ||||| | || ||||||| || || | ||| ||||||||| |||| Sbjct 60549 GAACTCATCCCCGTAAACGTCTGCCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCA 60608 Query 222016 GTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAG 222075 || ||| | | || | || ||||||||| || || |||||||| || | ||||| Sbjct 60609 GTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAG 60668 Query 222076 ATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAAT 222135 ||| | | || ||||| || | ||| || | || || | |||||||| | Sbjct 60669 ATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGAC 60728 Query 222136 GTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTG 222195 || || ||||| ||||| || |||| ||| | || || || |||||||| |||||||| Sbjct 60729 ATCCGCATGCCATGGCTCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTTTCCACCCTG 60788 Query 222196 ATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATC 222254 ||| || || | | | | |||||||| || || | || || | || ||||| Sbjct 60789 ATCGACGTATCT-TGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGT 60847 Query 222255 GACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-----GCAGACAT 222309 || || || || ||||| || ||| |||| | | ||| | || | Sbjct 60848 TTCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCC---GAATTCTGTGGATGTTGAGA- 60903 Query 222310 GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 ||||| || || || | || |||||||| || ||| |||| || ||||| ||| || Sbjct 60904 -CCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACC 60962 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGA 222429 || ||| ||||||||| | || | ||| || || || || | || | | | || Sbjct 60963 GTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGT 61022 Query 222430 ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTA 222489 || ||| || || |||||| ||||| || ||| | || ||||||| | ||| Sbjct 61023 ACCGGCCGAGAAGAGAGTGGGAGATGCGTGAGTGAAGAATTTGCTGGACATCAAGTTGTA 61082 Query 222490 CGTCTCTA----CGACTCTGGCGATGTTGTCCCCGTGAATCTGCA--TGGCGCATCTCAT 222543 ||||| | || || |||| | || |||||||| | || || | | || ||| Sbjct 61083 TGTCTCGATAGCCGCCT----CGATATCATCACCGTGAAT-TCCAACTGCCAC-TCGCAT 61136 Query 222544 GTACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAGCAGGTACGAT 222598 | ||||| || || | || ||| | ||||| ||| | ||| ||||| || Sbjct 61137 GATCATGTGTTGAGGGCGCT---CAGCAACCTTGCCATCGAGGCGTAGA--AGGTATGAC 61191 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTC 222641 ||||| |||||||| |||||||| | | || ||||||| Sbjct 61192 CGCTCCAGGGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCTC 61234 >seq15 Length=607589 Score = 131 bits (144), Expect = 3e-25 Identities = 334/512 (65%), Gaps = 9/512 (2%) Strand=Plus/Minus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873 |||| |||| |||||| ||||| | | ||||| | | ||| | |||| || | Sbjct 331199 GCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCTACCTTCG 331140 Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933 | | || || || || |||||||| || || || ||||||||||| ||||| |||||| Sbjct 331139 CCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTTGCGT 331080 Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993 | || |||||| | ||| || || |||||||| || ||| || |||||| | | Sbjct 331079 CTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAGTTGA 331020 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGC 26053 || | || ||||| || |||| || ||||| ||||| |||| | || |||||| Sbjct 331019 TCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---CACTTGA 330963 Query 26054 TCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAG 26112 ||| || |||| || ||||| | | | |||| ||||| || || |||||| Sbjct 330962 AGCAC-CGCCCAAGCAAGCAGGCCGTCCAAGCTGTTATCACCGAGGCCGTCGAAATCGAG 330904 Query 26113 AAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATG 26172 | || || | || |||||| | |||||| Sbjct 330903 CAAGAATTCTTAACCGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCTCATG 330844 Query 26173 AGCCAATACATTGAGTATGTGGCCGACCATCTGCT--GTGCCAGCTGGGACTCGCCAGAC 26230 | |||||||| || | ||| ||||| | |||||| |||| || ||| || | Sbjct 330843 AAGCAATACATCGAATTTGTTGCCGATCGTCTGCTCCTTGCC--CTCGGAAACGAGAAGG 330786 Query 26231 TCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCA 26290 |||||| | | ||||| |||||||| ||||| ||||| || | | || ||||||| Sbjct 330785 TCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGACCA 330726 Query 26291 ACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 ||||||| || ||| | ||||| ||||| ||| Sbjct 330725 ACTTCTTCGAGAAGCGTGTCGGTGACTACCAA 330694 >seq75 Length=245354 Score = 122 bits (134), Expect = 2e-22 Identities = 332/514 (65%), Gaps = 5/514 (1%) Strand=Plus/Plus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| |||| |||| |||||| ||||| | | ||||| | | ||| | |||| Sbjct 39015 CCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCTACC 39074 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 || | | | || || || || |||||||| || || || ||||||||||| ||||| ||| Sbjct 39075 TTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTT 39134 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989 ||| | || |||||| | ||| || || |||||||| || ||| || |||||| Sbjct 39135 GCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAG 39194 Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCAC 26049 | ||| | || ||||| || |||| || ||||| ||||| |||| | || ||| Sbjct 39195 TTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGCTTGCCTTCTCTTCTCG---CAC 39251 Query 26050 TTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGAT 26108 ||| ||| || |||| || ||||| | | | |||| ||||| || | || Sbjct 39252 TTGAAGCACCGTCC-AAGCAAGCAGGCCGTCCAAGATGTTATCACCGAGGCCGTCCAAAT 39310 Query 26109 CGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACT 26168 |||| | || || | || |||||| | || Sbjct 39311 CGAGCAAGAATTCTTAACCGAGGCCCTTCCTTGTGCTCTTCTCGGTATGAACGCAACTCT 39370 Query 26169 CATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAG 26228 |||| |||||||| |||| ||| ||||| | |||||| | || ||| | | Sbjct 39371 AATGAAGCAATACATCGAGTTTGTTGCCGATCGTCTGCTTCTCGCCCTCGGAAATGAGAA 39430 Query 26229 ACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGAC 26288 |||||| | | ||||| |||||||| ||||| ||||| || | | || ||||| Sbjct 39431 GGTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTTGCTGGCAAGAC 39490 Query 26289 CAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 ||||||||| || ||| | ||||| ||||| ||| Sbjct 39491 CAACTTCTTCGAGAAGCGTGTCGGTGACTACCAA 39524 Score = 107 bits (118), Expect = 4e-18 Identities = 182/259 (70%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || ||||||||||||||| |||||||| Sbjct 38634 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCCGAAGAAATTGATCTC 38693 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-A 25595 |||||||| | ||| ||| || | ||| ||||| ||| || ||| | | Sbjct 38694 TCCAAGGACCTTCACGATTGGAACAACAGACTCAACGACGACGAGCGTTACTTCATCTCA 38753 Query 25596 CGTGT--TGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 | ||| | |||||||| ||||| |||||||| || || |||||||| || |||| | Sbjct 38754 CATGTCCTCGCATTCTTCGCAGCATCTGATGGAATTGTCAACGAGAACCTTGTCGAGCGC 38813 Query 25654 TTCACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | ||||| | | | | | ||||| || |||||||||||||| || || Sbjct 38814 TTCAGTGGTGAAGTTCAAATTCCT-GAGGCTCGATGCTTCTACGGTTTCCAAATCATGAT 38872 Query 25713 CGAAAATGTGCACTCTGAG 25731 || || | ||||||||| Sbjct 38873 GGAGAACATCCACTCTGAG 38891 >seq155 Length=79386 Score = 111 bits (122), Expect = 3e-19 Identities = 427/660 (65%), Gaps = 32/660 (5%) Strand=Plus/Plus Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| ||||||||| |||||| ||| | | || | || ||||||||| || || || Sbjct 56687 GGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAAT 56746 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 |||||| || | || ||||| | | || ||||| || | ||| || | || Sbjct 56747 CCACAGGGCGTAGAAAAGATCGCGTGCACGAACTTCCTCTTTTCCATGGTTCTTTCGGAG 56806 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 || | |||||||| | || || ||||| ||||| || || | ||| | || || || Sbjct 56807 GTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTAAATGGCAAACGCTCCCGG 56866 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCG 222236 |||||||| ||||||||||| | ||| | | | | |||||||| || || | | Sbjct 56867 ACGCTTGTTTCCACCCTGATCGA-CATATCTTGCGGTGTTGTTGAAGACTCGGAGCATGG 56925 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | || | || ||||| || || || || ||||| || ||| |||| | Sbjct 56926 GCACAATGCCATTGGAGTTCCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCC---GAA 56982 Query 222297 TACTG-----GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTT 222351 | ||| | || | ||||| || || || | || |||||||| || ||| |||| Sbjct 56983 TTCTGTGGATGTTGAGA--CCGATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTT 57040 Query 222352 GAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGA 222411 || ||||| ||| || || ||| ||||||||| | || | ||| || || || || Sbjct 57041 TAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGA 57100 Query 222412 CATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCC 222471 | || | | | || || ||| || || |||||| || || || ||||| Sbjct 57101 AAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAGTGAAGTATTT 57160 Query 222472 CCTAGACATCAGATCGTACGTCTCTA----CGACTCTGGCGATGTTGTCCCCGTGAATCT 222527 || ||||||| | ||||||||| | || || |||| | || |||||||| | Sbjct 57161 GCTGGACATCAAGTTGTACGTCTCGATAGCCGCCT----CGATATCATCACCGTGAAT-T 57215 Query 222528 GCA--TGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGC 222581 || || | | || |||| ||||| || || | ||| || || || | ||| Sbjct 57216 CCAACTGCCAC-TCGCATGATCATGTGTTGAGGGCGCTCAGCA--ACTTTGCCATCGAGG 57272 Query 222582 TGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTC 222641 | ||| ||||| || ||||| |||||||| |||||||| | | || ||||||| Sbjct 57273 CGTAGA--AGGTATGACCGCTCCAGGGTCTTGAATCCAAAGTATTGGTAGTTGAAGTCTC 57330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833026892160