Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq153 87.8 9e-13 >seq153 Length=80566 Score = 87.8 bits (96), Expect = 9e-13 Identities = 165/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 |||||| || ||| || | ||| |||||||||| || || || | ||| | || | Sbjct 60621 CTCAACACGCTTCATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCACG 60680 Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 | ||| |||||||| || |||||| || || | ||| ||||| | ||| | ||||| Sbjct 60681 AACTTCCTCTTTTCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCA 60740 Query 26041 TGGTTCTAAATAGATAGCAAAA-CTACCTTTT-CTTTTTCCTCCACCTTGATCTACGTAT 26098 ||| || | ||||| ||||| || || ||| || |||||| ||||| |||||| Sbjct 60741 TGGCTCGAGGTAGATGGCAAACGCTCCCGGACGCTTGTT--TCCACCCTGATCGACGTAT 60798 Query 26099 CTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGT 26157 ||||| || | ||||| ||| | ||| || || | ||| | || ||| ||||| Sbjct 60799 CTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGAGTTTCCATTTGT 60857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253036872900050