Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq181 111 2e-19 seq57 105 8e-18 >seq181 Length=52435 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||||||||| ||||| || |||||||| || || ||||| || |||||||| ||||| || Sbjct 3502 TACACCAATTGGACCAACACCAGGACCACCGCCACCATGGGGGATACAGAAAGTCTTGTG 3561 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | || ||||| || ||||| || ||| |||| || ||||| | || || Sbjct 3562 AAGGTTGAGATGGCAGACATCGGCTCCAATCTCACCCGGAGAGCAAAGACCGATTTGGGC 3621 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352 || | |||||||||||| | || ||||| ||||||| ||||||||||| Sbjct 3622 GTTCATATTTGCACCATCCATGTACACCTGGCCACCATGTTCATGAACGAT 3672 >seq57 Length=326045 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||||||||| ||||| || |||||||| || || ||||| || |||||||| ||||| || Sbjct 58311 TACACCAATTGGACCAACACCAGGACCACCGCCACCATGGGGGATACAGAAAGTCTTGTG 58252 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | || ||||| || ||||| || ||| |||| || ||||| | || || Sbjct 58251 AAGGTTGAGATGGCAGACATCGGCTCCAATCTCACCCGGAGAGCAAAGACCGATTTGGGC 58192 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352 || | |||||||||||| | || ||||| ||||||| | ||||||||| Sbjct 58191 GTTCATATTTGCACCATCCATGTACACCTGGCCACCATGTTGATGAACGAT 58141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578991061195280