Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq153 269 3e-67 seq155 141 1e-28 seq75 107 2e-18 seq15 107 2e-18 >seq153 Length=80566 Score = 269 bits (298), Expect = 3e-67 Identities = 1194/1851 (65%), Gaps = 61/1851 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| ||||| ||| | || |||| ||| |||||||||| | Sbjct 61217 TACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGCAAGGTTGCT 61158 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || ||| || ||||| ||||||| || ||| | || || ||||| || || || || Sbjct 61157 GAGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGAG 61098 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTA--TGTTCATTCACGCAACACCAA 75323 | | | ||||||||| || ||||||| || | | |||| ||||||| | || | Sbjct 61097 GCGGCTATCGAGACATACAACTTGATGTCC--AGCAAATTCTTCACTCACGCATCTCCCA 61040 Query 75324 CCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 | |||||| || ||||| ||| || || || | || |||||||| |||| || Sbjct 61039 CTCTCTTCTCGGCCGGTACCCCACAGGCC-CAACTTTCATCATGCTTCCTGATCGACATG 60981 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||||||| || |||||||||| | || || | | ||||| ||||||||| Sbjct 60980 AAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAG 60921 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 ||||| || || || | ||||||| | | || | | || Sbjct 60920 AATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCC 60861 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || |||||||| | || |||| ||| | || ||||| || || || ||| ||| || Sbjct 60860 GGTACAAATGGAAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCA 60801 Query 75563 CGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAA 75616 | || || |||| | || ||||| ||| | | || ||||| | || Sbjct 60800 AGATACGTCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATCTACCTCGAG 60744 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 ||||||||||| ||| || | ||||||||||| | ||| ||||| || | || || Sbjct 60743 CCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAA 60684 Query 75677 GCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | ||| || | | |||||||| | ||||||||||||| || || ||||||||||| || Sbjct 60683 GTTCG-TGCACGCGATCTCTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGT 60625 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACG 75794 |||| || || | ||| |||| | || || || || || || || || | |||| Sbjct 60624 TGAGAAGAACGGAGACTGGACTCTGATGTGCCCCAACGAATGCCCC-GGCCTGGCAGACG 60566 Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAAT 75853 || || ||||| || || |||||| || || || |||| ||| || | | Sbjct 60565 TTTACGGGGATGAGTTCGAGGCTCTCTACGAGAAATACGAGAGAGAAGGTAAGGGTC--- 60509 Query 75854 GC--GACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910 || |||| | | || | | || | ||| | | || ||| | | || || ||||| Sbjct 60508 GCAAGACTAT-CAAGGCTCAGAAACTCTGGTACTCCATCCTCGAGGCCCAAACCGAGACC 60450 Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970 || | || | ||||| |||||||||||||| ||| ||||| ||||| ||||| || Sbjct 60449 GGGAACCCCTTCATGCTCTACAAGGATGCTTGCAACCGAAAGAGCAACCAGAAGAACCTG 60390 Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 ||||||||| ||||| || || ||||| |||||| | |||||| | | |||||| Sbjct 60389 GGAACAATCCGAAGCTCCAACCTGTGCACAGAAATTGTGGAGTACTCTGCCCCAGATGAG 60330 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT--CAATGAAGAGACTC 76088 ||||| ||||| ||||| || ||||||| |||| | || ||||| | || Sbjct 60329 GTAGCTGTCTGCAACTTGGCTTCTCTCGCCCTGCCAACCTTCGTTGACATGAACA-AC-G 60272 Query 76089 GCACTTTTGATTATGAAAAACTTCATGAAAT-CACAAAGATTGTTACCAAAAATCTAAAC 76147 |||| | || | | || ||||| || | | ||| | ||| ||| || || ||| Sbjct 60271 GCACCTACGACTTCCAGAAGCTTCACGAGGTGTGCCAAG-TCGTTGTCAAGAACCTGAAC 60213 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTT-GAGACTGCGCGAAAGTCTAATATGCGACA 76206 |||| || | |||| || || ||| ||| || ||||| || | ||||| Sbjct 60212 AAGATCATCGATATCAATTACTACCCTGTTCCAGA-GGCTAGAAAGAGCAACCTCCGACA 60154 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGC 76266 | || || | | |||||||||||||||| || |||| || || ||||| | Sbjct 60153 TCGCCCCATCGCTGTGGGTGTTCAAGGTCTTGCTGATGCGTTCCTTGCTCTCCGCTTACC 60094 Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326 || || || || |||||| | | || | |||||||| ||||| |||||||| Sbjct 60093 TTTCGAATCGCCCGAGGCCAAGTACCTCAACAAGCAAATCTTTGAGACCATCTATCACGC 60034 Query 76327 ----ATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 || ||| | || || ||| | || | | || || | || ||||||| | Sbjct 60033 CGCTCTCACTGCA-TCG-GT--TGAGCTTGCCAAGGTGCATGGACCTTACGAGACATACG 59978 Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC 76442 |||| || || | || | || | ||| || | || ||||||| || | || | | Sbjct 59977 AGGGCTCGCCAGTATCGAAGGGAGAGCTCCAATACGACATGTGGG-GTGTCACGCCTA-C 59920 Query 76443 T--CAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500 | | || || ||||| | ||| | | || | || | ||| | || ||| Sbjct 59919 TGACCTCTGGGATTGGGACAGCTTAAAGCAGCAGATTGCGCAGCACGGTGTCCGCAACTC 59860 Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560 ||| | |||| || |||||||| ||| |||| || || |||| || ||||| Sbjct 59859 TCTCCTCGTGGCTCCCATGCCAACTGCCAGCACCAGTCAGATTCTGGGCTTCAACGAATG 59800 Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCAT 76620 ||| || |||||||| | ||||| ||| | | || || || || || | Sbjct 59799 CTTCGAGCCATACACCTCCAACATTTACTCTCGTCGTGTGCTGGCTGGAGAATTCCAAGT 59740 Query 76621 TGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680 |||||| ||| |||| || ||| | | || ||||||||||| | | ||||| Sbjct 59739 CGTCAACCCTTGGCTCCTCAAGGATCTCGTGGACATGGGTCTCTGGTCTGACAACATGAA 59680 Query 76681 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT 76740 | | ||| | | |||||| ||||| || || ||| | ||||||||| || || Sbjct 59679 AAACCGCATCATCGCTGAGGGTGGCTCCATCCAGAACATCCCCAATATCCCAGCCGACAT 59620 Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGCC 76798 |||| ||| ||| || || ||||| | || | | | || || | | ||||| Sbjct 59619 CAAGGCTCTGTACAAGACGGTCTGGGAGATCTCTCAACGGACGA--TCGTCCAGATGGCT 59562 Query 76799 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTC 76856 || ||||||||| ||||||||||||| || ||| ||||| | |||| | | Sbjct 59561 GCTGATCGTGGTGCCTTCATTGATCAA--TCCCAGTCGATGAACATCCACATGAAGGACC 59504 Query 76857 CAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCG 76916 |||||||| |||| || | ||||| | | ||||| ||| || || |||| Sbjct 59503 CAACGATGGGCAAGATCACCAGCATGCACTTCACTGGCTGGAAGTTGGGTCTGAAGACCG 59444 Query 76917 GAATGTACTATCTCCGATCAAAGGCGAAAGC--CCG-ACCAATTCAGTTCA 76964 | ||||| || ||||| | | ||| ||| ||| ||| || ||||||| Sbjct 59443 GCATGTATTACCTCCGCACCATGGC---AGCCACCGCACCGATCCAGTTCA 59396 >seq155 Length=79386 Score = 141 bits (156), Expect = 1e-28 Identities = 401/607 (66%), Gaps = 17/607 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 |||||||| |||| ||||| ||| | || |||| ||| |||||||||| | Sbjct 57313 TACTTTGGATTCAAGACCCTGGAGCGGTCATACCTTCTACGCCTCGATGGCAAAGTTGCT 57254 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || ||| || ||||| ||||||| || ||| | || || ||||| || || || || Sbjct 57253 GAGCGCCCTCAACACATGATCATGCGAGTGGCAGTTGGAATTCACGGTGATGATATCGAG 57194 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAA 75323 | | | ||||| ||| || ||||||| ||| || |||| ||| ||| | || | Sbjct 57193 GCGGCTATCGAGACGTACAACTTGATGTCCAGCAAA-TAC-TTCACTCATGCATCTCCCA 57136 Query 75324 CCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 | |||||| || ||||| ||| || || || | || |||||||| |||| || Sbjct 57135 CTCTCTTCTCGGCCGGTACCCCACAGGCC-CAACTTTCATCATGCTTCCTGATCGACATG 57077 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||||||| || |||||||||| | || || | | ||||| ||||||||| Sbjct 57076 AAGGAGGACAGTATTGACGGTATCTACGACACGCTAAAGACCTGTGCAATGATCTCAAAG 57017 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 ||||| || || || | ||||||| | | || | | || Sbjct 57016 AATGCTGGAGGCATCGGTCTCAACATCCACAGAATTCGGGCTACCGGGGCCTACATCGCC 56957 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || |||||||| | || |||| ||| | || ||||| || || || ||| ||| || Sbjct 56956 GGTACAAATGGGAACTCCAATGGCATTGTGCCCATGCTCCGAGTCTTCAACAACACCGCA 56897 Query 75563 CGCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAA 75616 | ||||| |||| | || ||||| ||| | | || | ||| | || Sbjct 56896 AGATATGTCGATCAGGGTGGAAACAAGCGTCC---GGGAGCGTTTGCCATTTACCTCGAG 56840 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 ||||||||||| ||| || | ||||||||||| | ||| ||||| || | || || Sbjct 56839 CCATGGCATGCGGATGTCTTTGAGTTCCTTGACCTCCGAAAGAACCATGGAAAAGAGGAA 56780 Query 75677 GCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 | ||| || | | ||||| || | ||||||||||||| || || ||||||||||| || Sbjct 56779 GTTCG-TGCACGCGATCTTTTCTACGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGT 56721 Query 75736 TGAGGAG 75742 |||| || Sbjct 56720 TGAGAAG 56714 >seq75 Length=245354 Score = 107 bits (118), Expect = 2e-18 Identities = 161/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCT 65064 || || || ||| |||||||||| | |||||| | | |||| || |||| || ||| Sbjct 39012 GTTCCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCT 39071 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 |||||||| | || || | || ||||| || || |||||||| ||| || Sbjct 39072 A---CCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGT 39128 Query 65125 TCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 || || |||| |||||| |||||||||||||| ||||| ||||| || || |||||| Sbjct 39129 TCCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTC 39187 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 ||| || | || || || |||||||| || ||| || ||||| Sbjct 39188 AAACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 39232 >seq15 Length=607589 Score = 107 bits (118), Expect = 2e-18 Identities = 161/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCT 65064 || || || ||| |||||||||| | |||||| | | |||| || |||| || ||| Sbjct 331206 GTTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCT 331147 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 |||||||| | || || | || ||||| || || |||||||| ||| || Sbjct 331146 A---CCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGT 331090 Query 65125 TCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 || || |||| |||||| |||||||||||||| ||||| ||||| || || |||||| Sbjct 331089 TCCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTC 331031 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 ||| || | || || || |||||||| || ||| || ||||| Sbjct 331030 AAACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 330986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562038480320