Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq96 84.2 3e-11 seq7 84.2 3e-11 >seq96 Length=182788 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||||||| || || ||||||||||| || || Sbjct 166665 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATCACATTAGAAGTTGAGTCATCA 166724 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| || || || ||||| |||||||| || || || || Sbjct 166725 GACACAATTGACAATGTGAAGTCCAAGATCCAGGATAAGGAAGGCATCCCACCGGACCAG 166784 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || ||||||| | ||| ||||||||| | || ||| Sbjct 166785 CAGCGATTGATCTTTGCTGGTAAGCAGTTGGAGGAT 166820 >seq7 Length=756160 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||||||| || || ||||||||||| || || Sbjct 415658 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACAATCACATTAGAAGTTGAGTCATCA 415717 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| || || || ||||| |||||||| || || || || Sbjct 415718 GACACAATTGACAATGTGAAGTCCAAGATCCAGGATAAGGAAGGCATCCCACCGGACCAG 415777 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||| ||||||| | || |||||||| || || ||| Sbjct 415778 CAACGATTGATCTTCGCTGGTAAGCAACTAGAGGAT 415813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731862723522400