Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq15 122 3e-22
seq75 116 1e-20
seq16 93.3 1e-13
seq68 87.8 5e-12
seq64 84.2 6e-11
>seq15
Length=607589
Score = 122 bits (134), Expect = 3e-22
Identities = 164/226 (73%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 133432 CGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCG 133491
|||| ||||||| ||||| ||||| | |||||||| | | |||||| |||||||||
Sbjct 331210 CGAAGTTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAA 331151
Query 133492 TGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGG 133551
| | || || |||||||| || ||||||| || || || || |||||||||||
Sbjct 331150 CTCTACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGG 331091
Query 133552 TGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610
| | || ||| |||||||| ||| | || ||||| ||| | | || ||||| || |
Sbjct 331090 TTCCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCT 331032
Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656
| ||||| | || || | || |||| ||||||||||| |||||
Sbjct 331031 CAAACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 330986
>seq75
Length=245354
Score = 116 bits (128), Expect = 1e-20
Identities = 163/226 (72%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 133432 CGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCG 133491
|||| |||| || ||||| ||||| | |||||||| | | |||||| |||||||||
Sbjct 39008 CGAAGTTCCCTGCATTAAGAAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAA 39067
Query 133492 TGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGG 133551
| | || || |||||||| || ||||||| || || || || |||||||||||
Sbjct 39068 CTCTACCTTCGCCCAACGTCTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGG 39127
Query 133552 TGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610
| | || ||| |||||||| ||| | || ||||| ||| | | || ||||| || |
Sbjct 39128 TTCCTT-TGCGTCTATTTTCTGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCT 39186
Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656
| ||||| | || || | || |||| ||||||||||| |||||
Sbjct 39187 CAAACGAGTTGATCTCGCGTGATGAGGGCCTTCACACCGACTTTGC 39232
>seq16
Length=584397
Score = 93.3 bits (102), Expect = 1e-13
Identities = 171/251 (68%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| ||| ||| || || || ||| | ||||| || | || | | |
Sbjct 121622 ATGAGCCCACAGATATCACATACGTGAACTCTGAAGGCATCCGAAACCTCGAACAATCTC 121563
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| || ||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 121562 TCCTTCAAGAAAGCAGCGGCACCATGTGAGATCATACAATCACGCTCCATTTCTCCGAAA 121503
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
|| |||||||| || | || | ||| || | || || | || ||| | || |||
Sbjct 121502 CGTAGACCACCGTCTCTTGCACGACCTTCAACTGGTTGTCTTGTCAGAATTTGCACTGGA 121443
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| ||| || ||| ||| || | |||||||| ||||| |||||| |||
Sbjct 121442 CCTCTGGCACGAGCATGGATCTTGTCGTCGACCATATGGCGTAGACGTTGGTAGTATGTT 121383
Query 251647 GGACCGATGAA 251657
||||| | |||
Sbjct 121382 GGACCCAGGAA 121372
>seq68
Length=273079
Score = 87.8 bits (96), Expect = 5e-12
Identities = 170/251 (68%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| ||| ||| || || || ||| | ||||| || | ||| | | |
Sbjct 106579 ATCAGCCCACAGATATCACATACGTGAACTCTGAAGGCATCCGAAACTTCAAACAATCTC 106520
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| || ||||| ||||| ||||| ||||||||||||||||| ||||||
Sbjct 106519 TCCTTCAAGAAAGCAGCGGCACCATGTGAGATCATGCAATCACGCTCCATTTCTCCGAAA 106460
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
|| |||||||| || | || | ||| || | || || | || ||| | || |||
Sbjct 106459 CGTAGACCACCGTCTCTTGCACGACCTTCAACTGGTTGTCTTGTCAGAATTTGCACTGGA 106400
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| ||| || ||| ||| || | |||||||| ||||| |||||| | |
Sbjct 106399 CCTCTGGCACGAGCATGGATCTTGTCGTCGACCATATGGCGTAGACGTTGGTAGTACGTT 106340
Query 251647 GGACCGATGAA 251657
||||| | |||
Sbjct 106339 GGACCCAGGAA 106329
>seq64
Length=284877
Score = 84.2 bits (92), Expect = 6e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 354016 GCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACG 354075
|| ||| |||| || ||||||||||| | ||| ||||| |||||||| |||| || | |
Sbjct 113375 GCCAGACCACCCAGAGAGTCACGGTCCAAGAAGTTAGTGGGTTCGTCGAGGACGAGCAAG 113316
Query 354076 TGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGA 354131
|| || | ||||||| || | || || || ||||| ||||| ||||| |||||
Sbjct 113315 TGGGGGTTGTTCCACATAGCGCCCGCGAGCACGACCTTGACCTTTTGTCCCCCTGA 113260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471798478329718
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