Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq24 132 8e-25 seq49 127 3e-23 seq15 116 6e-20 seq155 109 9e-18 seq153 105 1e-16 seq75 104 4e-16 >seq24 Length=518978 Score = 132 bits (146), Expect = 8e-25 Identities = 106/128 (83%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 2035634 TGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAA 2035693 ||| ||| | | ||| |||||||||||||||||||||||||||| || | || ||||| Sbjct 154711 TGACTTGCTACAGGCCTCCAACTACCTCGACATCAAGCCCCTCCTTGACGTTGGCTGCAA 154770 Query 2035694 GACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 |||||| || ||| | |||||||||||||| |||||||| ||||||||||| || ||||| Sbjct 154771 GACCGTTGCGAACATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACGTTCAACAT 154830 Query 2035754 CAAGTACG 2035761 | | ||| Sbjct 154831 TACGAACG 154838 >seq49 Length=368986 Score = 127 bits (140), Expect = 3e-23 Identities = 105/128 (82%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 2035634 TGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAA 2035693 ||| ||| | | ||| |||||||||||||||||||||||||||| || | || ||||| Sbjct 87494 TGACTTGCTACAGGCCTCCAACTACCTCGACATCAAGCCCCTCCTTGACGTTGGCTGCAA 87553 Query 2035694 GACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753 |||||| || ||| | |||||||||||||| |||||||| ||||| ||||| || ||||| Sbjct 87554 GACCGTTGCGAACATGATCAAGGGCAAGTCCCCCGAGGAGATCCGGAAGACGTTCAACAT 87613 Query 2035754 CAAGTACG 2035761 | | ||| Sbjct 87614 TACGAACG 87621 >seq15 Length=607589 Score = 116 bits (128), Expect = 6e-20 Identities = 174/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 330681 TGACACCGGCCTTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 330740 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||||| | | |||| ||||||| |||| Sbjct 330741 GGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCGTTTCCGA 330800 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | ||||| || ||||| || ||||| ||||| || |||||| | ||||||| Sbjct 330801 GGGCAAGGAGCAGACGATCGGCAACAAATTCGATGTATTGCTTCATGAGAGTTGCGTTCA 330860 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | |||| || || || || | |||| | | || |||| |||||| |||||||||| Sbjct 330861 TACCGAGAAGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTCGACGGCCT 330920 Query 794131 CGATGAT 794137 || |||| Sbjct 330921 CGGTGAT 330927 >seq155 Length=79386 Score = 109 bits (120), Expect = 9e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| |||||||| | || |||| ||| ||||| |||||||||||||||| ||| ||||| Sbjct 56882 CTGATCGACATATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGA 56941 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | || || || || || | |||||| || | || || | |||| | | || Sbjct 56942 GTTCCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACC 57001 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || || ||| ||||| | || || | || ||||| |||||||| || || Sbjct 57002 GATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTC 57061 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | ||| ||||| || || ||| | | | || || Sbjct 57062 AATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACC 57121 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||| |||||| ||||| Sbjct 57122 GGCCGAGAAGAGAGTGGG 57139 >seq153 Length=80566 Score = 105 bits (116), Expect = 1e-16 Identities = 178/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| || | || |||| ||| ||||| |||||||||||||||| ||| ||||| Sbjct 60786 CTGATCGACGTATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGA 60845 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | || || || || || | |||||| || | || || | |||| | | || Sbjct 60846 GTTTCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACC 60905 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || || ||| ||||| | || || | || ||||| |||||||| || || Sbjct 60906 GATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTC 60965 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | ||| ||||| || || ||| | | | || || Sbjct 60966 AATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACC 61025 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||| |||||| ||||| Sbjct 61026 GGCCGAGAAGAGAGTGGG 61043 Score = 86.0 bits (94), Expect = 1e-10 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 2071800 CAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCG 2071859 ||||||||| ||| ||||| | || | |||||| ||| || | || || Sbjct 60573 CAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTT 60632 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| || || ||| |||||||| |||| ||||||||||| || || ||||| || Sbjct 60633 CATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCACGAACTTCCTCTTT 60692 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 || ||||||||| ||||| || | || | || || || ||||| ||||| ||||| Sbjct 60693 TCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTA 60752 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTG 2072004 | |||||| || ||| |||||| Sbjct 60753 GATGGCAAACGCTCCCGGACGCTTG 60777 >seq75 Length=245354 Score = 104 bits (114), Expect = 4e-16 Identities = 171/247 (69%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 39537 TGACACCGGCCTTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 39478 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||||| | | |||| |||||| |||| Sbjct 39477 GGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCATTTCCGA 39418 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | |||||| || ||||| || || || ||||| || ||| || | ||||||| Sbjct 39417 GGGCGAGAAGCAGACGATCGGCAACAAACTCGATGTATTGCTTCATTAGAGTTGCGTTCA 39358 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | |||| || || || || | |||| | | || |||| |||||| | |||||||| Sbjct 39357 TACCGAGAAGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTGGACGGCCT 39298 Query 794131 CGATGAT 794137 || |||| Sbjct 39297 CGGTGAT 39291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916138536195146