Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq24 132 8e-25
seq49 127 3e-23
seq15 116 6e-20
seq155 109 9e-18
seq153 105 1e-16
seq75 104 4e-16
>seq24
Length=518978
Score = 132 bits (146), Expect = 8e-25
Identities = 106/128 (83%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 2035634 TGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAA 2035693
||| ||| | | ||| |||||||||||||||||||||||||||| || | || |||||
Sbjct 154711 TGACTTGCTACAGGCCTCCAACTACCTCGACATCAAGCCCCTCCTTGACGTTGGCTGCAA 154770
Query 2035694 GACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753
|||||| || ||| | |||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 154771 GACCGTTGCGAACATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACGTTCAACAT 154830
Query 2035754 CAAGTACG 2035761
| | |||
Sbjct 154831 TACGAACG 154838
>seq49
Length=368986
Score = 127 bits (140), Expect = 3e-23
Identities = 105/128 (82%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 2035634 TGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAA 2035693
||| ||| | | ||| |||||||||||||||||||||||||||| || | || |||||
Sbjct 87494 TGACTTGCTACAGGCCTCCAACTACCTCGACATCAAGCCCCTCCTTGACGTTGGCTGCAA 87553
Query 2035694 GACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753
|||||| || ||| | |||||||||||||| |||||||| ||||| ||||| || |||||
Sbjct 87554 GACCGTTGCGAACATGATCAAGGGCAAGTCCCCCGAGGAGATCCGGAAGACGTTCAACAT 87613
Query 2035754 CAAGTACG 2035761
| | |||
Sbjct 87614 TACGAACG 87621
>seq15
Length=607589
Score = 116 bits (128), Expect = 6e-20
Identities = 174/247 (70%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 330681 TGACACCGGCCTTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 330740
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||||| | | |||| ||||||| ||||
Sbjct 330741 GGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCGTTTCCGA 330800
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | ||||| || ||||| || ||||| ||||| || |||||| | |||||||
Sbjct 330801 GGGCAAGGAGCAGACGATCGGCAACAAATTCGATGTATTGCTTCATGAGAGTTGCGTTCA 330860
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| |||| || || || || | |||| | | || |||| |||||| ||||||||||
Sbjct 330861 TACCGAGAAGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTCGACGGCCT 330920
Query 794131 CGATGAT 794137
|| ||||
Sbjct 330921 CGGTGAT 330927
>seq155
Length=79386
Score = 109 bits (120), Expect = 9e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| |||||||| | || |||| ||| ||||| |||||||||||||||| ||| |||||
Sbjct 56882 CTGATCGACATATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGA 56941
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| || || || || || | |||||| || | || || | |||| | | ||
Sbjct 56942 GTTCCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACC 57001
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|||||| || || ||| ||||| | || || | || ||||| |||||||| || ||
Sbjct 57002 GATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTC 57061
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | ||| ||||| || || ||| | | | || ||
Sbjct 57062 AATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACC 57121
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||| |||||| |||||
Sbjct 57122 GGCCGAGAAGAGAGTGGG 57139
>seq153
Length=80566
Score = 105 bits (116), Expect = 1e-16
Identities = 178/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| ||||| || | || |||| ||| ||||| |||||||||||||||| ||| |||||
Sbjct 60786 CTGATCGACGTATCTTGCGGTGTTGTTGAAGACTCGGAGCATGGGCACAATGCCATTGGA 60845
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| || || || || || | |||||| || | || || | |||| | | ||
Sbjct 60846 GTTTCCATTTGTACCGGCGATGTAGGCCCCGGTAGCCCGAATTCTGTGGATGTTGAGACC 60905
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|||||| || || ||| ||||| | || || | || ||||| |||||||| || ||
Sbjct 60906 GATGCCTCCAGCATTCTTTGAGATCATTGCACAGGTCTTTAGCGTGTCGTAGATACCGTC 60965
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | ||| ||||| || || ||| | | | || ||
Sbjct 60966 AATACTGTCCTCCTTCATGTCGATCAGGAAGCATGATGAAAGTTGGGCCTGTGGGGTACC 61025
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||| |||||| |||||
Sbjct 61026 GGCCGAGAAGAGAGTGGG 61043
Score = 86.0 bits (94), Expect = 1e-10
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 2071800 CAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCG 2071859
||||||||| ||| ||||| | || | |||||| ||| || | || ||
Sbjct 60573 CAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTT 60632
Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919
||| || || ||| |||||||| |||| ||||||||||| || || ||||| ||
Sbjct 60633 CATGAAGAGATCGGGAATCCACAGGGCGTAGAAGAGATCGCGTGCACGAACTTCCTCTTT 60692
Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979
|| ||||||||| ||||| || | || | || || || ||||| ||||| |||||
Sbjct 60693 TCCATGGTTCTTTCGGAGGTCAAGGAACTCAAAGACATCCGCATGCCATGGCTCGAGGTA 60752
Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTG 2072004
| |||||| || ||| ||||||
Sbjct 60753 GATGGCAAACGCTCCCGGACGCTTG 60777
>seq75
Length=245354
Score = 104 bits (114), Expect = 4e-16
Identities = 171/247 (69%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 39537 TGACACCGGCCTTTTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 39478
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||||| | | |||| |||||| ||||
Sbjct 39477 GGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTAGACTTGTAGACCTTCTCATTTCCGA 39418
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | |||||| || ||||| || || || ||||| || ||| || | |||||||
Sbjct 39417 GGGCGAGAAGCAGACGATCGGCAACAAACTCGATGTATTGCTTCATTAGAGTTGCGTTCA 39358
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| |||| || || || || | |||| | | || |||| |||||| | ||||||||
Sbjct 39357 TACCGAGAAGAGCACAAGGAAGGGCCTCGGTTAAGAATTCTTGCTCGATTTGGACGGCCT 39298
Query 794131 CGATGAT 794137
|| ||||
Sbjct 39297 CGGTGAT 39291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916138536195146
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |