Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq7 116 4e-21 seq96 113 4e-20 seq102 86.0 6e-12 seq38 86.0 6e-12 seq75 84.2 2e-11 seq15 84.2 2e-11 >seq7 Length=756160 Score = 116 bits (128), Expect = 4e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | |||||| || | |||||||| ||||| |||||||| ||| | Sbjct 415656 CCACCACGAAGACGGAGAACTAAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 415597 Query 137245 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | || |||| || |||||||| || ||||| | || |||||||| ||||| || | Sbjct 415596 AAGGT--TCGACCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGG 415539 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | |||||||| || || ||| ||| ||| | | || | ||| || | || ||| | Sbjct 415538 GAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCA 415479 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| | || | ||||||||||| | || || ||||| ||||||||| Sbjct 415478 CTTCCAATGTAATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCATA 415429 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 |||||||| || | |||||| || || || | || || ||||| |||||||||||| Sbjct 415887 TGGCCTCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCG 415828 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 |||| |||| || || ||||| |||||||| |||||| |||||||| || || Sbjct 415827 CTCAAGGTGCGACCATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGT 415768 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || |||||||| || || || || || | | || | ||||||| | || Sbjct 415767 GGGATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCA 415708 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||| | || | ||||| || ||||| || || ||||| || |||||| Sbjct 415707 ACTTCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCATA 415657 >seq96 Length=182788 Score = 113 bits (124), Expect = 4e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | |||||| || | |||||||| ||||| |||||||| ||| | Sbjct 166663 CCACCACGAAGACGGAGAACTAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 166604 Query 137245 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | || |||| || ||||| || || |||||| | || |||||||| ||||| || | Sbjct 166603 AAGGT--TCGACCATCCTCGAGCTGCTTGCCAGCAAAAATGAGACGTTGTTGATCCGGGG 166546 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | |||||||| || || ||| ||| ||| | | || | ||| || | || || | Sbjct 166545 GAATGCCTTCCTTATCTTGAATCTTTGATTTGACGTTGTCGATCGTATCCGAGGACTCCA 166486 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||| | || | ||||||||||| | || || ||||| ||||||||| Sbjct 166485 CTTCCAATGTGATTGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCATA 166436 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 ||||| || || | |||||| || || || | || || ||||| |||||||||||| Sbjct 166894 TGGCCGCCACGAAGACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCG 166835 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 |||| |||| || || | || ||||||||| |||||| || ||||| || || Sbjct 166834 CTCAAGGTGCGACCATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGT 166775 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || |||||||| || || || || || | | || | ||||||| | || Sbjct 166774 GGGATGCCTTCCTTATCCTGGATCTTGGACTTCACATTGTCAATTGTGTCTGATGACTCA 166715 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||| | || | ||||| || ||||| || || ||||| || |||||| Sbjct 166714 ACTTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCATA 166664 >seq102 Length=175646 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | || | |||| || || || || || |||||||||||| Sbjct 56138 CCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAA 56197 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| |||||||||||| || || || ||||||| |||||||| ||||| || Sbjct 56198 AGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGG 56257 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| || || ||| | | || | ||||| | | || || Sbjct 56258 ATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACC 56317 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | |||||||| || | || || ||||| || ||||| Sbjct 56318 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 56364 >seq38 Length=423541 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | || | |||| || || || || || |||||||||||| Sbjct 319950 CCTCCACGGAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAA 320009 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| |||||||||||| || || || ||||||| |||||||| ||||| || Sbjct 320010 AGGGTGCGACCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGG 320069 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| || || ||| | | || | ||||| | | || || Sbjct 320070 ATCCCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATGGTGTCAGAAGACTCCACC 320129 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | |||||||| || | || || ||||| || ||||| Sbjct 320130 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 320176 >seq75 Length=245354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 50229 AAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaaCTTACTTTGGCCGAACGT 50288 || |||| ||| |||||| | | ||||| | | |||| || ||| || ||| ||||| Sbjct 39027 AAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCTACCTTCGCCCAACGT 39086 Query 50289 TTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTT 50348 | ||||| ||||| || |||||| | ||||| ||| |||||| | || || Sbjct 39087 CTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTTGCGTCTATTTTC 39146 Query 50349 TACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGC 50408 | | || | ||| | |||||||| ||||| || ||||||||||| ||||| Sbjct 39147 TGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAGTTGATCTCGCGT 39206 Query 50409 GACGAAGGAATGCACACAGACTTTGCGTG 50437 || || || | ||||| |||||||| || Sbjct 39207 GATGAGGGCCTTCACACCGACTTTGCTTG 39235 >seq15 Length=607589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 50229 AAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaaCTTACTTTGGCCGAACGT 50288 || |||| ||| |||||| | | ||||| | | |||| || ||| || ||| ||||| Sbjct 331191 AAGAAGGCCGACTGGGCAGTCAGATGGATTCAGGACAAGAACTCTACCTTCGCCCAACGT 331132 Query 50289 TTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTT 50348 | ||||| ||||| || |||||| | ||||| ||| |||||| | || || Sbjct 331131 CTCGTGGCATTTGCTGCGGTCGAAGGTATCTTTTTCAGTGGTTCCTTTGCGTCTATTTTC 331072 Query 50349 TACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGC 50408 | | || | ||| | |||||||| ||||| || ||||||||||| ||||| Sbjct 331071 TGGTTGAAGAAGCGAGGTCTGATGCCCGGACTCACCTTCTCAAACGAGTTGATCTCGCGT 331012 Query 50409 GACGAAGGAATGCACACAGACTTTGCGTG 50437 || || || | ||||| |||||||| || Sbjct 331011 GATGAGGGCCTTCACACCGACTTTGCTTG 330983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488537807704800