Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq102 123 2e-23
seq38 123 2e-23
seq96 102 8e-17
seq7 100 3e-16
seq59 86.0 6e-12
seq10 86.0 6e-12
>seq102
Length=175646
Score = 123 bits (136), Expect = 2e-23
Identities = 150/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||||||| | ||| ||| ||| ||||| ||||||||
Sbjct 56168 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACC-GTCTTCGAGTTGCTTGCC 56226
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || ||||||||||| ||||| ||||||||||| |||||| ||
Sbjct 56227 GGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTT 56286
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||| | | |||||| || | ||||| || ||||| || || ||
Sbjct 56287 GACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGT 56346
Query 133643 TTTTACGAAAATCTGCATGGCT 133664
|| ||||| ||||||||| ||
Sbjct 56347 CTTGACGAAGATCTGCATGACT 56368
>seq38
Length=423541
Score = 123 bits (136), Expect = 2e-23
Identities = 150/202 (74%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||||||| | ||| ||| ||| ||||| ||||||||
Sbjct 319980 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACC-GTCTTCGAGTTGCTTGCC 320038
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || || ||||||||||| ||||| ||||||||||| |||||| ||
Sbjct 320039 GGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGATTT 320098
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||| | | |||||| || | ||||| || ||||| || || ||
Sbjct 320099 GACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGT 320158
Query 133643 TTTTACGAAAATCTGCATGGCT 133664
|| ||||| ||||||||| ||
Sbjct 320159 CTTGACGAAGATCTGCATGACT 320180
>seq96
Length=182788
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || || || || ||||| ||| || || ||| | |||||||||||||||||
Sbjct 166633 GTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCA-TCCTCGAGCTGCTTGCC 166575
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| ||||||| || || || || || || ||||||||||| || |||||| ||
Sbjct 166574 AGCAAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAATCTTTGATTT 166515
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||| || | || |||||| || | |||| || |||||||| |||||
Sbjct 166514 GACGTTGTCGATCGTATCCGAGGACTCCACTTCCAATGTGATTGTCTTGCCGGTGAGAGT 166455
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| || |||||
Sbjct 166454 CTTGACGAAGATTTGCAT 166437
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| || || || |||||||||| || ||| ||| | ||||| | |||||| || ||
Sbjct 166856 CTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCA-TCCTCCAACTGCTTACCAGCAA 166798
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
| || | ||||||||||| || |||||||||||||| || |||||| ||| | |
Sbjct 166797 AGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTCACAT 166738
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
|||| ||||| | | ||| || || | |||| || || || |||| ||| || |
Sbjct 166737 TGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTCCAGTCAAAGTCTTGA 166678
Query 133648 CGAAAATCTGCAT 133660
|||| ||||||||
Sbjct 166677 CGAAGATCTGCAT 166665
Score = 91.5 bits (100), Expect = 1e-13
Identities = 126/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| | ||| ||| |||||| || ||||||||
Sbjct 166121 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACC-GTCCTCAAGTTGCTTGCC 166063
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|||| | || || || |||||||| || || ||||| |||||||| |||||| |||
Sbjct 166062 CGCGAAGATCAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTT 166003
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | || | ||||| | || || || || | |||| ||| ||||||||
Sbjct 166002 GACATTGTCGATGGTGTCAGAGGATTCAACCTCAAGAGTGATGGTCTTGCCGGT 165949
>seq7
Length=756160
Score = 100 bits (110), Expect = 3e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| || | ||| ||| |||||| || ||||||||
Sbjct 415114 GTAGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACC-GTCCTCAAGTTGCTTGCC 415056
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|||| | || || || |||||||||||||| ||||| |||||||| |||||| |||
Sbjct 415055 CGCGAAGATCAGACGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTT 414996
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | || | ||||||| || || || || | |||| ||| ||||||||
Sbjct 414995 GACATTGTCGATGGTGTCGGAGGATTCAACCTCAAGAGTGATGGTCTTGCCGGT 414942
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| || || || || || ||||| ||| || || ||| | ||||||||
Sbjct 415635 AAGTGCAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCGACCA-TCCTCGAG 415577
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||||| ||| ||||||| || || || || || || ||||||||||| || ||
Sbjct 415576 TTGCTTGCCAGCGAAAATGAGACGTTGTTGATCCGGGGGAATGCCTTCCTTATCTTGAAT 415517
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|||| |||| | || | ||| || | || ||||| || | || | || |||||
Sbjct 415516 CTTTGATTTGACGTTGTCGATCGTATCCGAGGATTCCACTTCCAATGTAATTGTCTTGCC 415457
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||||| || ||||| || |||||
Sbjct 415456 GGTGAGAGTCTTGACGAAGATTTGCAT 415430
Score = 93.3 bits (102), Expect = 4e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| || || || |||||||||| || ||| ||| | ||||| || ||||| || |||
Sbjct 415849 CTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACCA-TCCTCTAGTTGCTTACCAGCGA 415791
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
| || | || |||||||| || |||||||||||||| || |||||| ||| | |
Sbjct 415790 AGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGACTTCACAT 415731
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
|||| ||||| | | ||| || || | |||| || || || |||| || || |
Sbjct 415730 TGTCAATTGTGTCTGATGACTCAACTTCTAATGTGATTGTCTTTCCAGTCAAGGTCTTGA 415671
Query 133648 CGAAAATCTGCAT 133660
|||| ||||||||
Sbjct 415670 CGAAGATCTGCAT 415658
>seq59
Length=321881
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||| || ||||| || ||| | || || ||||||||||| || || || || |||||
Sbjct 265802 GTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 265861
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| |||| | || | ||||||| || ||| || || | |||||
Sbjct 265862 GTCCTGGATCTTGGATTTGACATTGTCGATTGTGTCGGAGGACTCGACCTCAAGGGTGAT 265921
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAA 133651
||| ||||| || || || || |||||
Sbjct 265922 GGTCTTGCCCGTAAGGGTCTTGACGAA 265948
>seq10
Length=717553
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||| || ||||| || ||| | || || ||||||||||| || || || || |||||
Sbjct 20082 GTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGAATTCCCTCCTT 20023
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| |||| | || | ||||||| || ||| || || | |||||
Sbjct 20022 GTCCTGGATCTTGGATTTGACATTGTCGATTGTGTCGGAGGACTCGACCTCAAGGGTGAT 19963
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAA 133651
||| ||||| || || || || |||||
Sbjct 19962 GGTCTTGCCCGTAAGGGTCTTGACGAA 19936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483414672641360
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