Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq96 107 1e-18
seq7 93.3 3e-14
seq102 91.5 1e-13
seq38 91.5 1e-13
>seq96
Length=182788
Score = 107 bits (118), Expect = 1e-18
Identities = 156/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| || ||||| || ||||||||||| ||||| |||||||||||| | ||||| |
Sbjct 166880 ACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACC 166821
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| ||||| || || || ||||| ||||| |||||||| || | || | ||||| ||
Sbjct 166820 ATCCTCCAACTGCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGTGGGATGCCTTCCTT 166761
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
|| || || ||| |||| ||| | ||||| ||| || || || | ||||
Sbjct 166760 ATCCTGGATCTTGGACTTC-ACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGA 166702
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || || || || || || || ||||||||||||
Sbjct 166701 TTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCATA 166664
>seq7
Length=756160
Score = 93.3 bits (102), Expect = 3e-14
Identities = 153/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| || ||||| || ||||||||||| ||||| |||||||||||| | ||||| |
Sbjct 415873 ACGCAAGACCAAGTGCAGAGTGCTCTCCTTTTGGATGTTGTAATCGCTCAAGGTGCGACC 415814
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| || | ||| || || || || ||||| || ||||| || | || | ||||| ||
Sbjct 415813 ATCCTCTAGTTGCTTACCAGCGAAGATCAATCGTTGCTGGTCCGGTGGGATGCCTTCCTT 415754
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
|| || || ||| |||| ||| | ||||| ||| || || || | ||||
Sbjct 415753 ATCCTGGATCTTGGACTTC-ACATTGTCAATTGTGTCTGATGACTCAACTTCTAATGTGA 415695
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || || || || || || || ||||||||||||
Sbjct 415694 TTGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCATA 415657
>seq102
Length=175646
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || |||||||||||||| || ||||| |||| || | |||
Sbjct 56162 TGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGC 56221
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| ||||| || |||| || ||||| || | || | ||||| ||||| || ||
Sbjct 56222 TTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTT- 56280
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
| || |||| ||| | |||||| || ||||| |||| ||||| || || || ||
Sbjct 56281 GGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGT 56340
Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749
| || || || |||||||||||
Sbjct 56341 GAGGGTCTTGACGAAGATCTGCAT 56364
>seq38
Length=423541
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || |||||||||||||| || ||||| |||| || | |||
Sbjct 319974 TGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGACCGTCTTCGAGTTGC 320033
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| ||||| || |||| || ||||| || | || | ||||| ||||| || ||
Sbjct 320034 TTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTT- 320092
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
| || |||| ||| | |||||| || ||||| |||| ||||| || || || ||
Sbjct 320093 GGATTTGACATTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGT 320152
Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749
| || || || |||||||||||
Sbjct 320153 GAGGGTCTTGACGAAGATCTGCAT 320176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328699937834880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |