Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18]
1,014 sequences; 54,474,545 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq96 104 6e-17
seq102 102 2e-16
seq38 102 2e-16
seq7 98.7 2e-15
seq153 96.9 8e-15
>seq96
Length=182788
Score = 104 bits (114), Expect = 6e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251
|||| || || || |||||| | || || ||| |||||||| |||| || |||
Sbjct 165947 TCACCGGCAAGACCATCACTCTTGAGGTTGAATCCTCTGACACCATCGACAATGTCAAGT 166006
Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311
||||| ||||| || || || ||| |||||| ||| | || |||||||| || |
Sbjct 166007 CCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAGCAACGTCTGATCTTCGCGGGCA 166066
Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371
|||| | || || || | ||| | |||| |||||| ||||||| ||||||||||| |
Sbjct 166067 AGCAACTTGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCTACTCTCC 166126
Query 206372 ACCTTGT 206378
|||||||
Sbjct 166127 ACCTTGT 166133
Score = 104 bits (114), Expect = 6e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || || ||||| ||||||||||| || || || ||||
Sbjct 166451 CAAGACTCTCACCGGCAAGACAATCACATTGGAAGTGGAGTCCTCGGATACGATCGACAA 166510
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || |||||||||||| || ||||| ||| ||||| ||| | || || ||
Sbjct 166511 CGTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATCAACAACGTCTCATTTT 166570
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || |||||| | || ||||| | || ||| |||| |||||| |||| || || ||
Sbjct 166571 TGCTGGCAAGCAGCTCGAGGATGGTCGAACCTTGTCCGACTACAACATCCAAAAGGAATC 166630
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
|||||| ||| | ||| | | |||||
Sbjct 166631 TACTCTGCACTTAGTTCTCCGTCTTCG 166657
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || ||||| || ||||| || ||||| || || |||
Sbjct 166668 CAGATCTTCGTCAAGACTTTGACTGGAAAGACAATCACATTAGAAGTTGAGTCATCAGAC 166727
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| | || || ||| ||||| || || || ||||| || |||||| ||
Sbjct 166728 ACAATTGACAATGTGAAGTCCAAGATCCAGGATAAGGAAGGCATCCCACCGGACCAGCAG 166787
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| || || ||||||||||| ||||| | || ||| |||||||||| ||
Sbjct 166788 CGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGCACCTTGAGCGATTACAACATC 166847
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || ||| ||||| ||| | || ||| | |||||
Sbjct 166848 CAAAAGGAGAGCACTCTGCACTTGGTCTTGCGTCTTCG 166885
>seq102
Length=175646
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || || ||||| | || ||||| |||||||
Sbjct 56361 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCTGAC 56302
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || || ||||| ||||| || ||||| || || ||| |||
Sbjct 56301 ACCATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGGATCCCACCCGACCAGCAA 56242
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| ||||| | ||||| || | || | ||||||||||| ||
Sbjct 56241 CGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGCACCCTTTCCGATTACAACATC 56182
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||||||||| ||
Sbjct 56181 CAGAAGGAGTCGACTCTTCACCTCGT 56156
>seq38
Length=423541
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || || ||||| | || ||||| |||||||
Sbjct 320173 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCTGAC 320114
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || || ||||| ||||| || ||||| || || ||| |||
Sbjct 320113 ACCATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGGATCCCACCCGACCAGCAA 320054
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| ||||| | ||||| || | || | ||||||||||| ||
Sbjct 320053 CGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGTCGCACCCTTTCCGATTACAACATC 319994
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| ||||||||||| ||
Sbjct 319993 CAGAAGGAGTCGACTCTTCACCTCGT 319968
>seq7
Length=756160
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || || || || |||||||||||| || || || ||||
Sbjct 415444 CAAGACTCTCACCGGCAAGACAATTACATTGGAAGTGGAATCCTCGGATACGATCGACAA 415503
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || |||||||||||| || ||||| ||| ||||| ||| | || || ||
Sbjct 415504 CGTCAAATCAAAGATTCAAGATAAGGAAGGCATTCCCCCGGATCAACAACGTCTCATTTT 415563
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| | || ||||| | || ||| |||| |||||| |||| || || ||
Sbjct 415564 CGCTGGCAAGCAACTCGAGGATGGTCGAACCTTGTCCGACTACAACATCCAAAAGGAATC 415623
Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390
||| || ||| | ||| | | |||||
Sbjct 415624 TACCCTGCACTTAGTTCTCCGTCTTCG 415650
Score = 89.7 bits (98), Expect = 1e-12
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251
|||| || || || |||||| | || || ||| || ||||| |||| || |||
Sbjct 414940 TCACCGGCAAGACCATCACTCTTGAGGTTGAATCCTCCGACACCATCGACAATGTCAAGT 414999
Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311
||||| ||||| || || || ||| || ||| ||| | || |||||||| || |
Sbjct 415000 CCAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAGCAACGTCTGATCTTCGCGGGCA 415059
Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371
|||| | || || || | ||| | | || |||||| ||||||| ||||||||||| |
Sbjct 415060 AGCAACTTGAGGACGGTCGCACTCTCTCTGACTACAACATCCAGAAGGAGTCTACTCTCC 415119
Query 206372 ACCTTGT 206378
|||||||
Sbjct 415120 ACCTTGT 415126
>seq153
Length=80566
Score = 96.9 bits (106), Expect = 8e-15
Identities = 173/248 (70%), Gaps = 6/248 (2%)
Strand=Plus/Plus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| |||||||||| |||||||| | || ||| | ||| ||| | | ||| || |
Sbjct 60421 GCATCCTTGTAGAGCATGAAGGGGTTCCCGGTCTCGGTTTGGGCCTCGAGGATGGAGTAC 60480
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCT-CG-CTCTT-CCTTCTTTTTCGTATCTCTCA 173223
|| |||| || || || | |||| | || | ||| |||||| | |||||| ||||
Sbjct 60481 CAGAGTTTCTGAGCCTTGA---TAGTCTTGCGACCCTTACCTTCTCTCTCGTATTTCTCG 60537
Query 173224 TAGAGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAA 173283
||||| | ||||| || | |||||||| || | || ||||| ||| || || ||
Sbjct 60538 TAGAGAGCCTCGAACTCATCCCCGTAAACGTCTGCCAGGCCGGGGCATTCGTTGGGGCAC 60597
Query 173284 AAGAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATC 173343
| ||| |||| | ||| | |||| || | |||||||||||| |||| | |||| |
Sbjct 60598 ATCAGAGTCCAGTCTCCGTTCTTCTCAACACGCTTCATGAAGAGATCGGGAATCCACAGG 60657
Query 173344 GCGTAGAA 173351
||||||||
Sbjct 60658 GCGTAGAA 60665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181805445931894
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |