Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amorphotheca_20resinae_20[genbank_20GCA_5F001270345.1_202015-08-18] 1,014 sequences; 54,474,545 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq153 111 1e-19 seq155 98.7 9e-16 >seq153 Length=80566 Score = 111 bits (122), Expect = 1e-19 Identities = 196/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 138123 GGCAGCACGAATT-TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGG 138181 || ||| |||||| || | | |||||| |||||||| || | | || || ||||| | Sbjct 60876 GGTAGCCCGAATTCTGTGG-ATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTG 60934 Query 138182 CACAATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGAT 138241 |||| || || || ||||| |||| || ||||| |||| |||| || || Sbjct 60935 CACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGA 60994 Query 138242 AACACGACGACATTTGAGGCATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGG 138301 | || || || | ||| | | | | || |||||||| ||||||||| ||||| | Sbjct 60995 AGCATGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCGTGAG 61054 Query 138302 TAAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCAT 138361 | || | ||| | |||||| | |||| |||||| || ||||||||||||||| | Sbjct 61055 TGAAGAATTTGCTGGACATCAAGTTGTATGTCTCGATAGCCGCCTCGATATCATCACCGT 61114 Query 138362 GAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGGTCTCTC 138404 |||| || || || ||||| | |||||||||||| | ||| Sbjct 61115 GAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 61157 >seq155 Length=79386 Score = 98.7 bits (108), Expect = 9e-16 Identities = 193/283 (68%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 138123 GGCAGCACGAATT-TGAGTTACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGG 138181 || ||| |||||| || | | |||||| |||||||| || | | || || ||||| | Sbjct 56972 GGTAGCCCGAATTCTGTGG-ATGTTGAGACCGATGCCTCCAGCATTCTTTGAGATCATTG 57030 Query 138182 CACAATCGTTGAGAGTTCTATAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGAT 138241 |||| || || || ||||| |||| || ||||| |||| |||| || || Sbjct 57031 CACAGGTCTTTAGCGTGTCGTAGATACCGTCAATACTGTCCTCCTTCATGTCGATCAGGA 57090 Query 138242 AACACGACGACATTTGAGGCATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGG 138301 | || || || | ||| | | | | || |||||||| ||||||||| || || | Sbjct 57091 AGCATGATGAAAGTTGGGCCTGTGGGGTACCGGCCGAGAAGAGAGTGGGAGATGCATGAG 57150 Query 138302 TAAACATTTTCGAGCGCATCAATCTATATGACTCGATCGCACTCTCGATATCATCACCAT 138361 | || ||| | |||||| | || | |||||| || ||||||||||||||| | Sbjct 57151 TGAAGTATTTGCTGGACATCAAGTTGTACGTCTCGATAGCCGCCTCGATATCATCACCGT 57210 Query 138362 GAATCTGAAGAGCGACACGCATCAGCATGTGTTGAGGTCTCTC 138404 |||| || || || ||||| | |||||||||||| | ||| Sbjct 57211 GAATTCCAACTGCCACTCGCATGATCATGTGTTGAGGGCGCTC 57253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445088758428480